Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0731
         (433 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-654|AAF45968.1|  180|Drosophila melanogaster CG7038-PA ...    80   1e-15
AY071518-1|AAL49140.1|  180|Drosophila melanogaster RE56957p pro...    79   3e-15
BT021374-1|AAX33522.1|  821|Drosophila melanogaster LP02965p pro...    29   2.7  
AE013599-589|AAF59135.2|  821|Drosophila melanogaster CG8711-PA ...    29   2.7  
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ...    28   6.2  

>AE014298-654|AAF45968.1|  180|Drosophila melanogaster CG7038-PA
           protein.
          Length = 180

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 37/60 (61%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
 Frame = +2

Query: 257 SKLFRVERIKSSKHFPYWQKRILDELKIH-EETRVTVVKNIPEINAKLWKIKHLIKITPI 433
           +KLFRV+RIK  K  PYW+ RIL +L +  +++  TVVKNIPE NA+LWKIKHLIK+TP+
Sbjct: 55  AKLFRVQRIKPLKGNPYWENRILKDLGLDGKQSDFTVVKNIPENNARLWKIKHLIKVTPV 114



 Score = 34.7 bits (76), Expect = 0.054
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = +3

Query: 117 GKLLRNFNPLVSIIRSKGYKHPGGIRYPGG-----ITYYPRFPDYKDPEI 251
           G+LL         +RS G KH     Y  G     ITYYPR PD++DP +
Sbjct: 4   GRLLNPLRSTACSVRSYG-KHNKKFLYKNGQKFEGITYYPRTPDHQDPPV 52


>AY071518-1|AAL49140.1|  180|Drosophila melanogaster RE56957p
           protein.
          Length = 180

 Score = 79.0 bits (186), Expect = 3e-15
 Identities = 36/60 (60%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
 Frame = +2

Query: 257 SKLFRVERIKSSKHFPYWQKRILDELKIH-EETRVTVVKNIPEINAKLWKIKHLIKITPI 433
           +KLFRV+RI+  K  PYW+ RIL +L +  +++  TVVKNIPE NA+LWKIKHLIK+TP+
Sbjct: 55  AKLFRVQRIRPLKGNPYWENRILKDLGLDGKQSDFTVVKNIPENNARLWKIKHLIKVTPV 114



 Score = 34.7 bits (76), Expect = 0.054
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = +3

Query: 117 GKLLRNFNPLVSIIRSKGYKHPGGIRYPGG-----ITYYPRFPDYKDPEI 251
           G+LL         +RS G KH     Y  G     ITYYPR PD++DP +
Sbjct: 4   GRLLNPLRSTACSVRSYG-KHNKKFLYKNGQKFEGITYYPRTPDHQDPPV 52


>BT021374-1|AAX33522.1|  821|Drosophila melanogaster LP02965p
           protein.
          Length = 821

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +1

Query: 130 EILIHWFLSFDQKVINIQEVFVTLGA*HTIPDSQITKI 243
           E + HW+LSF Q++I I+ +F+ +   + + +S +  I
Sbjct: 194 EKINHWWLSFCQQMIMIRSIFLYMDRTYVLQNSTVHSI 231


>AE013599-589|AAF59135.2|  821|Drosophila melanogaster CG8711-PA
           protein.
          Length = 821

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +1

Query: 130 EILIHWFLSFDQKVINIQEVFVTLGA*HTIPDSQITKI 243
           E + HW+LSF Q++I I+ +F+ +   + + +S +  I
Sbjct: 194 EKINHWWLSFCQQMIMIRSIFLYMDRTYVLQNSTVHSI 231


>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
            protein.
          Length = 4671

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +3

Query: 165  KGYKHPGGIRYPGGITYYPRFPDYKDPEI 251
            KGYK PG     G I Y    P Y  PE+
Sbjct: 4304 KGYKVPGTKSLQGFIDYINSLPAYDTPEV 4332


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,388,225
Number of Sequences: 53049
Number of extensions: 355336
Number of successful extensions: 799
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)