Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0728
(305 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008868-1|AAH08868.1| 463|Homo sapiens NADH dehydrogenase (ubi... 112 2e-25
BC001456-1|AAH01456.1| 463|Homo sapiens NADH dehydrogenase (ubi... 112 2e-25
BC000170-1|AAH00170.1| 463|Homo sapiens NADH dehydrogenase (ubi... 112 2e-25
AL590714-8|CAH72148.1| 463|Homo sapiens NADH dehydrogenase (ubi... 112 2e-25
AK222618-1|BAD96338.1| 463|Homo sapiens NADH dehydrogenase (ubi... 112 2e-25
AF050640-1|AAC27453.1| 463|Homo sapiens NADH-ubiquinone oxidore... 112 2e-25
AF013160-1|AAC34362.1| 463|Homo sapiens NADH dehydrogenase-ubiq... 112 2e-25
BC000795-1|AAH00795.1| 403|Homo sapiens signal-transducing adap... 28 6.1
AK000241-1|BAA91028.1| 449|Homo sapiens protein ( Homo sapiens ... 28 6.1
AJ245719-1|CAB65105.1| 403|Homo sapiens brk kinase substrate pr... 28 6.1
BC025757-1|AAH25757.1| 473|Homo sapiens Unknown (protein for IM... 27 8.1
AJ310567-1|CAC83946.1| 1544|Homo sapiens phosphoinositide-bindin... 27 8.1
>BC008868-1|AAH08868.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 112 bits (269), Expect = 2e-25
Identities = 52/75 (69%), Positives = 60/75 (80%)
Frame = +1
Query: 13 DVLTTNRIWVQRTKDIGVVTAQDALNYGFSGVMLRGSGIKWDLRKTHPYDXYPFVEXDVP 192
++LT NRIW RT DIGVVTA++ALNYGFSGVMLRGSGI+WDLRKT PYD Y VE DVP
Sbjct: 260 ELLTNNRIWRNRTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVP 319
Query: 193 IGTXGXXYXRXYVSR 237
+G+ G Y R Y+ R
Sbjct: 320 VGSRGDCYDR-YLCR 333
>BC001456-1|AAH01456.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 112 bits (269), Expect = 2e-25
Identities = 52/75 (69%), Positives = 60/75 (80%)
Frame = +1
Query: 13 DVLTTNRIWVQRTKDIGVVTAQDALNYGFSGVMLRGSGIKWDLRKTHPYDXYPFVEXDVP 192
++LT NRIW RT DIGVVTA++ALNYGFSGVMLRGSGI+WDLRKT PYD Y VE DVP
Sbjct: 260 ELLTNNRIWRNRTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVP 319
Query: 193 IGTXGXXYXRXYVSR 237
+G+ G Y R Y+ R
Sbjct: 320 VGSRGDCYDR-YLCR 333
>BC000170-1|AAH00170.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 112 bits (269), Expect = 2e-25
Identities = 52/75 (69%), Positives = 60/75 (80%)
Frame = +1
Query: 13 DVLTTNRIWVQRTKDIGVVTAQDALNYGFSGVMLRGSGIKWDLRKTHPYDXYPFVEXDVP 192
++LT NRIW RT DIGVVTA++ALNYGFSGVMLRGSGI+WDLRKT PYD Y VE DVP
Sbjct: 260 ELLTNNRIWRNRTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVP 319
Query: 193 IGTXGXXYXRXYVSR 237
+G+ G Y R Y+ R
Sbjct: 320 VGSRGDCYDR-YLCR 333
>AL590714-8|CAH72148.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 112 bits (269), Expect = 2e-25
Identities = 52/75 (69%), Positives = 60/75 (80%)
Frame = +1
Query: 13 DVLTTNRIWVQRTKDIGVVTAQDALNYGFSGVMLRGSGIKWDLRKTHPYDXYPFVEXDVP 192
++LT NRIW RT DIGVVTA++ALNYGFSGVMLRGSGI+WDLRKT PYD Y VE DVP
Sbjct: 260 ELLTNNRIWRNRTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVP 319
Query: 193 IGTXGXXYXRXYVSR 237
+G+ G Y R Y+ R
Sbjct: 320 VGSRGDCYDR-YLCR 333
>AK222618-1|BAD96338.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 112 bits (269), Expect = 2e-25
Identities = 52/75 (69%), Positives = 60/75 (80%)
Frame = +1
Query: 13 DVLTTNRIWVQRTKDIGVVTAQDALNYGFSGVMLRGSGIKWDLRKTHPYDXYPFVEXDVP 192
++LT NRIW RT DIGVVTA++ALNYGFSGVMLRGSGI+WDLRKT PYD Y VE DVP
Sbjct: 260 ELLTNNRIWRNRTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVP 319
Query: 193 IGTXGXXYXRXYVSR 237
+G+ G Y R Y+ R
Sbjct: 320 VGSRGDCYDR-YLCR 333
>AF050640-1|AAC27453.1| 463|Homo sapiens NADH-ubiquinone
oxidoreductase NDUFS2 subunit protein.
Length = 463
Score = 112 bits (269), Expect = 2e-25
Identities = 52/75 (69%), Positives = 60/75 (80%)
Frame = +1
Query: 13 DVLTTNRIWVQRTKDIGVVTAQDALNYGFSGVMLRGSGIKWDLRKTHPYDXYPFVEXDVP 192
++LT NRIW RT DIGVVTA++ALNYGFSGVMLRGSGI+WDLRKT PYD Y VE DVP
Sbjct: 260 ELLTNNRIWRNRTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVP 319
Query: 193 IGTXGXXYXRXYVSR 237
+G+ G Y R Y+ R
Sbjct: 320 VGSRGDCYDR-YLCR 333
>AF013160-1|AAC34362.1| 463|Homo sapiens NADH
dehydrogenase-ubiquinone Fe-S protein 2 precursor
protein.
Length = 463
Score = 112 bits (269), Expect = 2e-25
Identities = 52/75 (69%), Positives = 60/75 (80%)
Frame = +1
Query: 13 DVLTTNRIWVQRTKDIGVVTAQDALNYGFSGVMLRGSGIKWDLRKTHPYDXYPFVEXDVP 192
++LT NRIW RT DIGVVTA++ALNYGFSGVMLRGSGI+WDLRKT PYD Y VE DVP
Sbjct: 260 ELLTNNRIWRNRTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVP 319
Query: 193 IGTXGXXYXRXYVSR 237
+G+ G Y R Y+ R
Sbjct: 320 VGSRGDCYDR-YLCR 333
>BC000795-1|AAH00795.1| 403|Homo sapiens signal-transducing adaptor
protein-2 protein.
Length = 403
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 108 HTAESVVERVLRSDHADVLGPLHPDPVGGEXVXLVP 1
HT +++V +L D+ VLG + D GE V + P
Sbjct: 236 HTKKALVPFLLDEDYEKVLGYVEADKENGENVWVAP 271
>AK000241-1|BAA91028.1| 449|Homo sapiens protein ( Homo sapiens
cDNA FLJ20234 fis, clone COLF5673. ).
Length = 449
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 108 HTAESVVERVLRSDHADVLGPLHPDPVGGEXVXLVP 1
HT +++V +L D+ VLG + D GE V + P
Sbjct: 236 HTKKALVPFLLDEDYEKVLGYVEADKENGENVWVAP 271
>AJ245719-1|CAB65105.1| 403|Homo sapiens brk kinase substrate
protein.
Length = 403
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 108 HTAESVVERVLRSDHADVLGPLHPDPVGGEXVXLVP 1
HT +++V +L D+ VLG + D GE V + P
Sbjct: 236 HTKKALVPFLLDEDYEKVLGYVEADKENGENVWVAP 271
>BC025757-1|AAH25757.1| 473|Homo sapiens Unknown (protein for
IMAGE:5201730) protein.
Length = 473
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 39 GAADQGHRRGHCAGRAQLRIQRCD 110
GA D+ RG C GRA+ R+ R D
Sbjct: 215 GAPDRRESRGVCQGRAEHRLSRQD 238
>AJ310567-1|CAC83946.1| 1544|Homo sapiens phosphoinositide-binding
proteins protein.
Length = 1544
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 39 GAADQGHRRGHCAGRAQLRIQRCD 110
GA D+ RG C GRA+ R+ R D
Sbjct: 215 GAPDRRESRGVCQGRAEHRLSRQD 238
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,431,020
Number of Sequences: 237096
Number of extensions: 576339
Number of successful extensions: 1036
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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