Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0725
         (436 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5ZVN4 Cluster: Glycosyltransferase; n=4; Legionella pn...    33   2.0  
UniRef50_Q8I551 Cluster: Putative uncharacterized protein; n=1; ...    32   4.6  

>UniRef50_Q5ZVN4 Cluster: Glycosyltransferase; n=4; Legionella
           pneumophila|Rep: Glycosyltransferase - Legionella
           pneumophila subsp. pneumophila (strain Philadelphia 1
           /ATCC 33152 / DSM 7513)
          Length = 391

 Score = 33.5 bits (73), Expect = 2.0
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -1

Query: 190 NLLQNTYFYALTIYYLLHTVITELISFQAVNI*TLRLXSLSPGSALILRLKNIYTI 23
           N L N Y Y L +Y+LLH     ++ F    I   +  S  P +++I  L+ ++T+
Sbjct: 186 NFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTL 241


>UniRef50_Q8I551 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1915

 Score = 32.3 bits (70), Expect = 4.6
 Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
 Frame = -3

Query: 380 YLFHKLRHSFHIKNVILRNILYLLFINTII*ELSRHNIIC--YFVLLALSSKDRDIKLNV 207
           Y F+ ++++F +   + +NIL +LF N +   L+  N+     + +LA +SK+R  +LN+
Sbjct: 691 YFFNLVKNNFFLYINVDKNILNVLFNNELQMFLNNKNLNYKNLYHMLAYNSKNRYNQLNI 750

Query: 206 LKT*NKFTSKHLFLCLNYLLPTAYGDN*IDQFSSRKYLNTT 84
                K   K++   + Y+L   Y D+  ++  + K L  T
Sbjct: 751 RLLFYKVIFKNI---IKYILYIKYDDHKYEKNQNIKNLKET 788


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,230,126
Number of Sequences: 1657284
Number of extensions: 5199814
Number of successful extensions: 8811
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8808
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)