Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0725
         (436 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK074686-1|BAC11138.1|  143|Homo sapiens protein ( Homo sapiens ...    31   1.7  
CR533511-1|CAG38542.1|  344|Homo sapiens ZDHHC4 protein.               31   2.3  
BC001239-1|AAH01239.1|  344|Homo sapiens ZDHHC4 protein protein.       31   2.3  
AY359090-1|AAQ89448.1|  344|Homo sapiens ZDHHC4 protein.               31   2.3  
AK223532-1|BAD97252.1|  344|Homo sapiens zinc finger, DHHC domai...    31   2.3  
AK001341-1|BAA91636.1|  344|Homo sapiens protein ( Homo sapiens ...    31   2.3  
AF201931-1|AAF86867.1|  344|Homo sapiens DC1 protein.                  31   2.3  

>AK074686-1|BAC11138.1|  143|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90205 fis, clone MAMMA1001957, highly similar to
           Minor histocompatibility antigen 13 isoform 4. ).
          Length = 143

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 211 MF*KHRINLLQNTYFYALTIYYLLHTVITELISFQ 107
           +F +  INLL + YF+ L I  L HT+ +E IS Q
Sbjct: 95  IFSQEYINLLLSMYFFVLGILALSHTIRSEGISLQ 129


>CR533511-1|CAG38542.1|  344|Homo sapiens ZDHHC4 protein.
          Length = 344

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = -3

Query: 383 HYLFHKLRHSFHIKNVILRNILYLLFINTII-----*ELSRHNIICYFVLLALS 237
           HYLFH   H+F + +++L+ ++Y  +   +       ELS H ++  ++LL ++
Sbjct: 58  HYLFHTRNHTFIVLHLVLQGMVYTEYTWEVFGYCQELELSLHYLLLPYLLLGVN 111


>BC001239-1|AAH01239.1|  344|Homo sapiens ZDHHC4 protein protein.
          Length = 344

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = -3

Query: 383 HYLFHKLRHSFHIKNVILRNILYLLFINTII-----*ELSRHNIICYFVLLALS 237
           HYLFH   H+F + +++L+ ++Y  +   +       ELS H ++  ++LL ++
Sbjct: 58  HYLFHTRNHTFIVLHLVLQGMVYTEYTWEVFGYCQELELSLHYLLLPYLLLGVN 111


>AY359090-1|AAQ89448.1|  344|Homo sapiens ZDHHC4 protein.
          Length = 344

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = -3

Query: 383 HYLFHKLRHSFHIKNVILRNILYLLFINTII-----*ELSRHNIICYFVLLALS 237
           HYLFH   H+F + +++L+ ++Y  +   +       ELS H ++  ++LL ++
Sbjct: 58  HYLFHTRNHTFIVLHLVLQGMVYTEYTWEVFGYCQELELSLHYLLLPYLLLGVN 111


>AK223532-1|BAD97252.1|  344|Homo sapiens zinc finger, DHHC domain
           containing 4 variant protein.
          Length = 344

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = -3

Query: 383 HYLFHKLRHSFHIKNVILRNILYLLFINTII-----*ELSRHNIICYFVLLALS 237
           HYLFH   H+F + +++L+ ++Y  +   +       ELS H ++  ++LL ++
Sbjct: 58  HYLFHTRNHTFIVLHLVLQGMVYTEYTWEVFGYCQELELSLHYLLLPYLLLGVN 111


>AK001341-1|BAA91636.1|  344|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10479 fis, clone NT2RP2000120. ).
          Length = 344

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = -3

Query: 383 HYLFHKLRHSFHIKNVILRNILYLLFINTII-----*ELSRHNIICYFVLLALS 237
           HYLFH   H+F + +++L+ ++Y  +   +       ELS H ++  ++LL ++
Sbjct: 58  HYLFHTRNHTFIVLHLVLQGMVYTEYTWEVFGYCQELELSLHYLLLPYLLLGVN 111


>AF201931-1|AAF86867.1|  344|Homo sapiens DC1 protein.
          Length = 344

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = -3

Query: 383 HYLFHKLRHSFHIKNVILRNILYLLFINTII-----*ELSRHNIICYFVLLALS 237
           HYLFH   H+F + +++L+ ++Y  +   +       ELS H ++  ++LL ++
Sbjct: 58  HYLFHTRNHTFIVLHLVLQGMVYTEYTWEVFGYCQELELSLHYLLLPYLLLGVN 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,309,531
Number of Sequences: 237096
Number of extensions: 777663
Number of successful extensions: 550
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)