Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0724
         (428 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   3.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   3.8  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   6.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    20   8.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    20   8.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    20   8.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    20   8.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    20   8.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    20   8.7  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 156 PVRIQGAHTSGPGQ*CSRFYVQELEAAL 239
           PVRI G H  G    C++      E AL
Sbjct: 196 PVRIMGVHRPGFDNDCNKNTSTSKEIAL 223


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 142 HPAPSHSSLNTPTL 101
           HPA +HS+L +P +
Sbjct: 121 HPAAAHSALLSPAM 134


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 129 DGAGCSQAPPVRIQGAHTSGP 191
           + +  S  PP+ I GA  +GP
Sbjct: 300 EDSSISGVPPLSIDGALEAGP 320


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -3

Query: 339 YGYHHHGTRGIRQQH 295
           YG HHH +  +   H
Sbjct: 11  YGSHHHQSGSVAGHH 25


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +2

Query: 290 RTCCCRIPRVPWWWY 334
           R     +PR   WWY
Sbjct: 264 RQIALTVPRYQAWWY 278


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +2

Query: 290 RTCCCRIPRVPWWWY 334
           R     +PR   WWY
Sbjct: 264 RQIALTVPRYQAWWY 278


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +2

Query: 290 RTCCCRIPRVPWWWY 334
           R     +PR   WWY
Sbjct: 264 RQIALTVPRYQAWWY 278


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +2

Query: 290 RTCCCRIPRVPWWWY 334
           R     +PR   WWY
Sbjct: 264 RQIALTVPRYQAWWY 278


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +2

Query: 290 RTCCCRIPRVPWWWY 334
           R     +PR   WWY
Sbjct: 264 RQIALTVPRYQAWWY 278


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,069
Number of Sequences: 336
Number of extensions: 1766
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)