Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0721
         (421 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   2.8  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   3.7  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   6.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   6.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.4  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 128 PPFGKYPLLCMVRLKSTPKCLTACLKTS 45
           P F K PLLC+V   S     T  L++S
Sbjct: 218 PKFKKKPLLCVVSTLSCYLERTELLRSS 245


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 148 PPPSRDHHPSGNTLFY 101
           PP  + HHP   T+ Y
Sbjct: 37  PPSDKLHHPIHQTVIY 52


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 242 LLKWLLNGGWC*GETPRDLQEHSHRV 319
           +LKW+L  G     TP   +   HR+
Sbjct: 1   MLKWVLKVGNVLAMTPTKEKRFPHRI 26


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 242 LLKWLLNGGWC*GETPRDLQEHSHRV 319
           +LKW+L  G     TP   +   HR+
Sbjct: 1   MLKWVLKVGNVLAMTPTKEKRFPHRI 26


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 361 PLAFSGANC 335
           PL FSG NC
Sbjct: 12  PLGFSGINC 20


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,109
Number of Sequences: 336
Number of extensions: 2126
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)