Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0719
(426 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y315 Cluster: Putative deoxyribose-phosphate aldolase... 43 0.002
UniRef50_Q5XJS7 Cluster: Zgc:101610; n=15; cellular organisms|Re... 39 0.037
UniRef50_Q4SRI9 Cluster: Chromosome undetermined SCAF14526, whol... 38 0.065
UniRef50_Q7K209 Cluster: LD25963p; n=6; Coelomata|Rep: LD25963p ... 36 0.35
UniRef50_Q5D8M8 Cluster: SJCHGC02379 protein; n=1; Schistosoma j... 35 0.61
UniRef50_UPI00006D0069 Cluster: hypothetical protein TTHERM_0077... 35 0.81
UniRef50_A0D7P6 Cluster: Chromosome undetermined scaffold_40, wh... 33 1.9
UniRef50_Q9K061 Cluster: Putative uncharacterized protein; n=4; ... 33 3.3
UniRef50_Q2UP50 Cluster: Predicted transporter; n=6; Ascomycota|... 33 3.3
UniRef50_Q4H2P9 Cluster: Transforming growth factor beta recepto... 32 4.3
UniRef50_Q4Z6H8 Cluster: Putative uncharacterized protein; n=6; ... 32 5.7
UniRef50_Q2R8K4 Cluster: Retrotransposon protein, putative, LINE... 31 7.5
UniRef50_Q54ET5 Cluster: Leucyl-tRNA synthetase; n=1; Dictyostel... 31 7.5
UniRef50_Q4RRM8 Cluster: Chromosome 16 SCAF15002, whole genome s... 31 9.9
UniRef50_Q552E8 Cluster: Putative uncharacterized protein; n=2; ... 31 9.9
UniRef50_Q6BPZ9 Cluster: Probable kinetochore protein NDC80; n=1... 31 9.9
>UniRef50_Q9Y315 Cluster: Putative deoxyribose-phosphate aldolase;
n=48; cellular organisms|Rep: Putative
deoxyribose-phosphate aldolase - Homo sapiens (Human)
Length = 318
Score = 43.2 bits (97), Expect = 0.002
Identities = 24/44 (54%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +2
Query: 242 LDNTSGDDTSSNVRRLCRKAAYPIPIDI---MNPSDNLHTXAAV 364
L SGDDTSSN++RLC KA YPI D+ +N D T AAV
Sbjct: 56 LTTLSGDDTSSNIQRLCYKAKYPIREDLLKALNMHDKGITTAAV 99
Score = 32.3 bits (70), Expect = 4.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 135 INKSNVDSQVXSILYNNVVXPKDERAWLMKAITLIDLTTL 254
+N V + I V + + AWL+KA+T IDLTTL
Sbjct: 20 VNHPAVLRRAEQIQARRTVKKEWQAAWLLKAVTFIDLTTL 59
>UniRef50_Q5XJS7 Cluster: Zgc:101610; n=15; cellular organisms|Rep:
Zgc:101610 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 318
Score = 39.1 bits (87), Expect = 0.037
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +2
Query: 242 LDNTSGDDTSSNVRRLCRKAAYPIPIDIMNPSDNLHTXAAVSTLQRCL 385
L +GDDT SNV RLC KA PI D++ D +H +ST C+
Sbjct: 56 LTTLAGDDTPSNVHRLCMKATQPIRHDLLKSMD-MH-DKGISTAAVCV 101
Score = 33.5 bits (73), Expect = 1.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 135 INKSNVDSQVXSILYNNVVXPKDERAWLMKAITLIDLTTL 254
+N V + I V + + AWL+KA+T IDLTTL
Sbjct: 20 VNTQAVHKRAQQIQGRKVAKKQWQAAWLLKAVTCIDLTTL 59
>UniRef50_Q4SRI9 Cluster: Chromosome undetermined SCAF14526, whole
genome shotgun sequence; n=3; Clupeocephala|Rep:
Chromosome undetermined SCAF14526, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 338
Score = 38.3 bits (85), Expect = 0.065
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2
Query: 242 LDNTSGDDTSSNVRRLCRKAAYPIPIDIMNPSD 340
L SGDDT SNV+RLC KA P+ D++ D
Sbjct: 46 LTTLSGDDTPSNVQRLCLKAIQPVRRDLLQKMD 78
Score = 35.1 bits (77), Expect = 0.61
Identities = 17/22 (77%), Positives = 19/22 (86%), Gaps = 2/22 (9%)
Frame = +3
Query: 195 PKD--ERAWLMKAITLIDLTTL 254
PKD + AWL+KAITLIDLTTL
Sbjct: 28 PKDRWQAAWLLKAITLIDLTTL 49
>UniRef50_Q7K209 Cluster: LD25963p; n=6; Coelomata|Rep: LD25963p -
Drosophila melanogaster (Fruit fly)
Length = 347
Score = 35.9 bits (79), Expect = 0.35
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 242 LDNTSGDDTSSNVRRLCRKAAYP 310
L +GDDT++NVRRLC +A YP
Sbjct: 62 LTTLAGDDTAANVRRLCLRACYP 84
>UniRef50_Q5D8M8 Cluster: SJCHGC02379 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02379 protein - Schistosoma
japonicum (Blood fluke)
Length = 175
Score = 35.1 bits (77), Expect = 0.61
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 242 LDNTSGDDTSSNVRRLCRKAAYPIPIDIMN 331
L +GDDT N++RLC KAA+P+ I+N
Sbjct: 54 LTTLAGDDTPVNIQRLCVKAAHPLSECILN 83
Score = 31.1 bits (67), Expect = 9.9
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +3
Query: 135 INKSNVDSQVXSILYNNVVXPKDERAWLMKAITLIDLTTL 254
+ SNV Q+ + L N + E WL+KA+ LIDLTTL
Sbjct: 19 VEASNV-IQLANELTNVKLSADIEMEWLLKAVCLIDLTTL 57
>UniRef50_UPI00006D0069 Cluster: hypothetical protein
TTHERM_00773390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00773390 - Tetrahymena
thermophila SB210
Length = 1788
Score = 34.7 bits (76), Expect = 0.81
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +3
Query: 66 FEIHEMVRAIFETIDDMPLDNTFINKSNVDSQVXSILYNNVVXPKDERAWLMKAITLIDL 245
+E ++ I I+ LD N N V ++YN V + + WL I +
Sbjct: 8 YESPTLIYKILSNINKHELDCLLYNFKNNICSVFELIYNPAVSKRSRKNWLQVVILFVKK 67
Query: 246 TTLLVMTHHQML 281
L + HH+++
Sbjct: 68 FDLTLPAHHELI 79
>UniRef50_A0D7P6 Cluster: Chromosome undetermined scaffold_40, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_40,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1028
Score = 33.5 bits (73), Expect = 1.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 143 FIYKCII*GHIINSFKNSSHHFVDFETF 60
F + + GHIINSFK HH + F+ F
Sbjct: 636 FYFSILYEGHIINSFKIQHHHLIKFKPF 663
>UniRef50_Q9K061 Cluster: Putative uncharacterized protein; n=4;
Neisseria|Rep: Putative uncharacterized protein -
Neisseria meningitidis serogroup B
Length = 242
Score = 32.7 bits (71), Expect = 3.3
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -3
Query: 232 VIAFISHALSSLGXTTLLYNIDXT*ESTLLLFINVLSKGISSIVSKIAR 86
++ I SL T +L NI T + LLLF+ + GISS+ +KI +
Sbjct: 83 ILGLIGQVGVSLDQTRVLQNILYTAANLLLLFLGLYLSGISSLAAKIEK 131
>UniRef50_Q2UP50 Cluster: Predicted transporter; n=6;
Ascomycota|Rep: Predicted transporter - Aspergillus
oryzae
Length = 533
Score = 32.7 bits (71), Expect = 3.3
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 75 HEMVRAIFETIDDMPLDNTFINKSNVDSQV 164
HE RA+ I+D PLD+ ++K+ +D QV
Sbjct: 236 HEEARAVVAAIEDRPLDDALVSKTILDIQV 265
>UniRef50_Q4H2P9 Cluster: Transforming growth factor beta receptor;
n=2; Chordata|Rep: Transforming growth factor beta
receptor - Ciona intestinalis (Transparent sea squirt)
Length = 629
Score = 32.3 bits (70), Expect = 4.3
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +3
Query: 84 VRAIFETIDDMPLDNTFINKSNVDSQVXSILYNNVVXPKDERAWLMKAITLIDLTTLLVM 263
++++F D L N+ + +++ + + N VV P +E W++ TL+ +T L ++
Sbjct: 102 IKSVFFCCCDNDLCNSHFSLGHINKTIKTNEENPVVVPTNEETWVVLVYTLVPITLLSLL 161
>UniRef50_Q4Z6H8 Cluster: Putative uncharacterized protein; n=6;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 1243
Score = 31.9 bits (69), Expect = 5.7
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 87 RAIFETIDDMPLDNTFINKSNVD-SQVXSILYNNVVXPKDERAWLMKAI 230
+ +++TI D P++ T+IN++N+ + LY N+ P + + + I
Sbjct: 753 KKLYQTIYDKPIETTYINENNLKIKSLNYFLYKNIFIPINNHFYTINQI 801
>UniRef50_Q2R8K4 Cluster: Retrotransposon protein, putative, LINE
subclass; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
LINE subclass - Oryza sativa subsp. japonica (Rice)
Length = 540
Score = 31.5 bits (68), Expect = 7.5
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -3
Query: 235 RVIAFISHALSSLGXTTLLYNIDXT*ESTLLLFINVLSKGISSIVSKIARTISWISKLLL 56
R+ ++SH ++S+G T++ + + LL+ IN K + + KI R W K LL
Sbjct: 112 RLPLWMSHLMTSIGRATMVNAVLSSIPIYLLMAINA-PKWVIKGIDKIRRGFLWAGKALL 170
Query: 55 -KFYFLNCVISKILI 14
K L + ++L+
Sbjct: 171 RKLCILKVSVRELLV 185
>UniRef50_Q54ET5 Cluster: Leucyl-tRNA synthetase; n=1; Dictyostelium
discoideum AX4|Rep: Leucyl-tRNA synthetase -
Dictyostelium discoideum AX4
Length = 940
Score = 31.5 bits (68), Expect = 7.5
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 102 TIDDMPLDNTFINKSNVDSQVXSILYNNVVXPKDERAWLMKAITLIDLTT 251
T++ P+D T + VD+Q S N +V K+ + W K ++ D T
Sbjct: 167 TVNWDPIDQTVLANEQVDAQGRSWRSNAIVEKKEMKQWFYKITSMADRLT 216
>UniRef50_Q4RRM8 Cluster: Chromosome 16 SCAF15002, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 16 SCAF15002, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 437
Score = 31.1 bits (67), Expect = 9.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 130 VLSKGISSIVSKIARTISWISKLLLKFYF 44
+L+KGIS I + + T+ W+S L+ F+F
Sbjct: 226 LLTKGISRIKKRASPTVRWVSLKLIPFFF 254
>UniRef50_Q552E8 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 222
Score = 31.1 bits (67), Expect = 9.9
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 224 SNHSN*LDNTSGDDTSSNVRRLCRKAAYPIP-IDIMNPSDNLHTXA 358
+N++N +N +DT S +RRL RK + P+P +D N + N+ A
Sbjct: 159 NNNNNNKNNNKNNDTPSPIRRL-RKGSLPLPSLDPENDNKNIFKNA 203
>UniRef50_Q6BPZ9 Cluster: Probable kinetochore protein NDC80; n=1;
Debaryomyces hansenii|Rep: Probable kinetochore protein
NDC80 - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 650
Score = 31.1 bits (67), Expect = 9.9
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +3
Query: 36 QFKK*NLSKSFEIHEMVRAIFETIDDMPLDNTFINKSNVDSQV-----XSILYNNVVXPK 200
Q K N +FEI+ I D+ N INK+ D ++ SI+ NV +
Sbjct: 446 QLKNHNYDYNFEINFRNNTIINETPDLLKPNEIINKNLKDEKIQLLNYKSIINTNVHMHQ 505
Query: 201 DERAWLMKAITLIDLTTLLVMTHHQMLE 284
DE+ L + IDL + L+M + +E
Sbjct: 506 DEQIKLQEQ---IDLISELIMERREEIE 530
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 354,148,652
Number of Sequences: 1657284
Number of extensions: 5507102
Number of successful extensions: 12006
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12003
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -