Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0719
         (426 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011013-1|AAR30173.1|  290|Drosophila melanogaster SD14515p pro...    36   0.023
AY061335-1|AAL28883.1|  347|Drosophila melanogaster LD25963p pro...    36   0.023
AE013599-1486|AAF58511.1|  347|Drosophila melanogaster CG8525-PA...    36   0.023
AF239608-1|AAF63500.1| 1551|Drosophila melanogaster SP1070 protein.    28   6.0  
AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA...    28   6.0  

>BT011013-1|AAR30173.1|  290|Drosophila melanogaster SD14515p
           protein.
          Length = 290

 Score = 35.9 bits (79), Expect = 0.023
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 242 LDNTSGDDTSSNVRRLCRKAAYP 310
           L   +GDDT++NVRRLC +A YP
Sbjct: 5   LTTLAGDDTAANVRRLCLRACYP 27


>AY061335-1|AAL28883.1|  347|Drosophila melanogaster LD25963p
           protein.
          Length = 347

 Score = 35.9 bits (79), Expect = 0.023
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 242 LDNTSGDDTSSNVRRLCRKAAYP 310
           L   +GDDT++NVRRLC +A YP
Sbjct: 62  LTTLAGDDTAANVRRLCLRACYP 84


>AE013599-1486|AAF58511.1|  347|Drosophila melanogaster CG8525-PA
           protein.
          Length = 347

 Score = 35.9 bits (79), Expect = 0.023
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 242 LDNTSGDDTSSNVRRLCRKAAYP 310
           L   +GDDT++NVRRLC +A YP
Sbjct: 62  LTTLAGDDTAANVRRLCLRACYP 84


>AF239608-1|AAF63500.1| 1551|Drosophila melanogaster SP1070 protein.
          Length = 1551

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = -2

Query: 293 DKVF*HLMMCHHQ---KCCQVN*SDCFHKPC 210
           D++F H  +CH       C +N  DC ++PC
Sbjct: 226 DRLFDHECVCHPGWTGSACDINIDDCENRPC 256


>AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA
            protein.
          Length = 3396

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = -2

Query: 293  DKVF*HLMMCHHQ---KCCQVN*SDCFHKPC 210
            D++F H  +CH       C +N  DC ++PC
Sbjct: 2067 DRLFDHECVCHPGWTGSACDINIDDCENRPC 2097


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,198,451
Number of Sequences: 53049
Number of extensions: 265260
Number of successful extensions: 550
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)