Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0715
         (432 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   2.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   2.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   2.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   3.8  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   5.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   8.8  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   8.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   8.8  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 374 TDYNNYAIAYNCKY 415
           ++YNNY   ++C+Y
Sbjct: 222 SNYNNYQEGFSCQY 235


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 374 TDYNNYAIAYNCKY 415
           ++YNNY   ++C+Y
Sbjct: 242 SNYNNYQEGFSCQY 255


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +2

Query: 326 FKFGEISRDGSVQVLATDYNNYAIAYNCK 412
           F FG  + +G        YNN +    CK
Sbjct: 15  FHFGAFTCEGCKSFFGRTYNNISSISECK 43


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 236 RAYHRRLKKYIEGTAKLTDDANKAAKLTVTFKFGEI 343
           RA+   LK+  E    L D      KLT+ F  GE+
Sbjct: 538 RAFLAVLKRRTEIYKGLIDRIKSREKLTMKFHDGEV 573


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 422 CHRICSCK 399
           CHR+ SCK
Sbjct: 140 CHRVLSCK 147


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 374 TDYNNYAIAYNCK 412
           T+Y+N+ + YN K
Sbjct: 497 TEYHNWRVVYNNK 509


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -2

Query: 254 AVDDMHVLDLHH 219
           ++ ++H+ DLHH
Sbjct: 401 SIVNLHIYDLHH 412


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -2

Query: 254 AVDDMHVLDLHH 219
           ++ ++H+ DLHH
Sbjct: 401 SIVNLHIYDLHH 412


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,965
Number of Sequences: 336
Number of extensions: 1532
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)