Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0712
         (433 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    28   3.3  
Z83106-1|CAB05493.1|  359|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = +3

Query: 75   QNAPGH*YVSGKSLEKIEKIQLTKLSEIKFDHKITSCVLVLTTLHCISL 221
            Q+ P H +    S ++  + + ++ + +K  HK   C  ++ T+HC+ L
Sbjct: 2233 QSCPAHHHHHHSSTDRNNRERSSQNAIMKMFHKKRMCADLVKTIHCLQL 2281


>Z83106-1|CAB05493.1|  359|Caenorhabditis elegans Hypothetical
           protein F22B8.1 protein.
          Length = 359

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 171 KITSCVLVLTTLHCISLMIQYIF 239
           K  S +L+LTTL  ISL+I  IF
Sbjct: 209 KSWSAILILTTLSVISLVINSIF 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,617,092
Number of Sequences: 27780
Number of extensions: 148887
Number of successful extensions: 359
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)