Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0710
         (428 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       25   1.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   2.0  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    23   3.5  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   4.6  
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         22   8.0  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    22   8.0  

>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +1

Query: 169 FPNESEKNGKCSSAEYKLEGDVVKVKN 249
           + ++ E++   ++AE+ L+ DV++V N
Sbjct: 170 YDDDDEEDAAAAAAEFPLQKDVIRVTN 196


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +1

Query: 187 KNGKCSSA---EYKLEGDVVKVKNVQSSTASRSI*KGRPS 297
           + G+CSS    ++   G   +  N  SSTAS S+  G PS
Sbjct: 731 REGRCSSVSGGDWSPMGGDQQNSNGSSSTASSSVSTGMPS 770


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 142 GKLSS*SCSPVSARGRCLRE*LQQSPPQA 56
           GKLS  + S +S   +C+ E L++ PP A
Sbjct: 346 GKLSYEAVSEMSYLEQCISETLRKHPPVA 374


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 234 GEGQERAIIDGVKKYIEGTAKLTDD 308
           G+G ER I+  +  +IE    L+DD
Sbjct: 484 GKGLERIIVQRLNAHIEEVNGLSDD 508


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = +3

Query: 330 TVTFKFGEISRDGSVQVLATDYNNYAI--AYN 419
           T+TFK G+         LATDY    +  +YN
Sbjct: 53  TLTFKDGQTYTQAIAFTLATDYGTVRLMSSYN 84


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 260  RRRQEVYRRDGQAHRRRQ*SRKANSHF 340
            RRR+E+ R   Q  RR + S+    HF
Sbjct: 1191 RRRREMERTRRQRQRRARDSQAITIHF 1217


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,435
Number of Sequences: 2352
Number of extensions: 6296
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)