Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0710
         (428 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084185-1|AAL89923.1|  224|Drosophila melanogaster RE67583p pro...    48   7e-06
AF276505-1|AAF85707.1|  224|Drosophila melanogaster neural Lazar...    48   7e-06
AE014134-249|AAF51378.2|  224|Drosophila melanogaster CG33126-PA...    48   7e-06
AE014297-2056|AAN13668.1|  219|Drosophila melanogaster CG14872-P...    33   0.21 
BT025827-1|ABF85727.1|  175|Drosophila melanogaster IP07407p pro...    31   0.50 
AE014134-248|AAN10468.1|  192|Drosophila melanogaster CG31659-PA...    31   0.50 
AY070838-1|AAL48460.2|  227|Drosophila melanogaster GH09946p pro...    31   0.65 
AE013599-1646|AAF58418.1|  212|Drosophila melanogaster CG4604-PA...    31   0.65 
AF276506-1|AAF85708.1|  212|Drosophila melanogaster glial Lazari...    31   0.87 
BT001634-1|AAN71389.1|  451|Drosophila melanogaster RE38701p pro...    29   2.0  
AY058715-1|AAL13944.1|  451|Drosophila melanogaster LD45348p pro...    29   2.0  
AE014297-327|AAF51973.2|  648|Drosophila melanogaster CG2179-PB,...    29   2.0  
AE014297-326|AAF51972.2|  783|Drosophila melanogaster CG2179-PA,...    29   2.0  

>AY084185-1|AAL89923.1|  224|Drosophila melanogaster RE67583p
           protein.
          Length = 224

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 76  EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKN 249
           +V   G CP++K ++ F+  AY G+WYE + +P   E   KC  A Y L +   V V N
Sbjct: 26  QVPFPGKCPDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYSLIDNSTVSVVN 84



 Score = 27.5 bits (58), Expect = 8.1
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 378 VLATDYNNYAIAYNC 422
           VL TDY +YA+ Y+C
Sbjct: 126 VLGTDYESYAVVYSC 140


>AF276505-1|AAF85707.1|  224|Drosophila melanogaster neural
           Lazarillo protein.
          Length = 224

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 76  EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKN 249
           +V   G CP++K ++ F+  AY G+WYE + +P   E   KC  A Y L +   V V N
Sbjct: 26  QVPFPGKCPDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYSLIDNSTVSVVN 84



 Score = 27.5 bits (58), Expect = 8.1
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 378 VLATDYNNYAIAYNC 422
           VL TDY +YA+ Y+C
Sbjct: 126 VLGTDYESYAVVYSC 140


>AE014134-249|AAF51378.2|  224|Drosophila melanogaster CG33126-PA
           protein.
          Length = 224

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 76  EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKN 249
           +V   G CP++K ++ F+  AY G+WYE + +P   E   KC  A Y L +   V V N
Sbjct: 26  QVPFPGKCPDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYSLIDNSTVSVVN 84



 Score = 27.5 bits (58), Expect = 8.1
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 378 VLATDYNNYAIAYNC 422
           VL TDY +YA+ Y+C
Sbjct: 126 VLGTDYESYAVVYSC 140


>AE014297-2056|AAN13668.1|  219|Drosophila melanogaster CG14872-PA,
           isoform A protein.
          Length = 219

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 121 NFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKLEGDVVKV 243
           NFNLT   G WYE ++ PN         S   ++E D++ +
Sbjct: 47  NFNLTQLSGYWYEAARVPNVQVLECLNVSVPAEIENDILSL 87


>BT025827-1|ABF85727.1|  175|Drosophila melanogaster IP07407p
           protein.
          Length = 175

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 91  GTCPE-LKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEY 216
           G CP  +  V + ++  ++G WY  S +P+ S +  KC S ++
Sbjct: 8   GACPSNMTAVGDLDMDRFKGKWYTHSIYPHLSLRVEKCQSTDF 50


>AE014134-248|AAN10468.1|  192|Drosophila melanogaster CG31659-PA
           protein.
          Length = 192

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 91  GTCPE-LKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEY 216
           G CP  +  V + ++  ++G WY  S +P+ S +  KC S ++
Sbjct: 25  GACPSNMTAVGDLDMDRFKGKWYTHSIYPHLSLRVEKCQSTDF 67


>AY070838-1|AAL48460.2|  227|Drosophila melanogaster GH09946p
           protein.
          Length = 227

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +1

Query: 91  GTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYK--LEGDVVKVKNVQSST 264
           G CP    +  FN++   G WYE+ +     E    C++ +++   +G+  K  N + + 
Sbjct: 46  GRCPNYPSMPKFNMSRVLGHWYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNFKLAV 105

Query: 265 ASRSI 279
           A ++I
Sbjct: 106 AIKNI 110



 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 366 GSVQVLATDYNNYAIAYNC 422
           G  QVL TDY N+AI ++C
Sbjct: 154 GKYQVLYTDYENFAILWSC 172


>AE013599-1646|AAF58418.1|  212|Drosophila melanogaster CG4604-PA
           protein.
          Length = 212

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +1

Query: 91  GTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYK--LEGDVVKVKNVQSST 264
           G CP    +  FN++   G WYE+ +     E    C++ +++   +G+  K  N + + 
Sbjct: 31  GRCPNYPSMPKFNMSRVLGHWYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNFKLAV 90

Query: 265 ASRSI 279
           A ++I
Sbjct: 91  AIKNI 95



 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 366 GSVQVLATDYNNYAIAYNC 422
           G  QVL TDY N+AI ++C
Sbjct: 139 GKYQVLYTDYENFAILWSC 157


>AF276506-1|AAF85708.1|  212|Drosophila melanogaster glial Lazarillo
           protein.
          Length = 212

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +1

Query: 91  GTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYK--LEGDVVKVKNVQSST 264
           G CP    +  FN++   G WYE+ +     E    C++ +++   +G+  K  N + + 
Sbjct: 31  GRCPNYPSMPKFNMSRVLGHWYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNSKLAV 90

Query: 265 ASRSI 279
           A ++I
Sbjct: 91  AIKNI 95



 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 366 GSVQVLATDYNNYAIAYNC 422
           G  QVL TDY N+AI ++C
Sbjct: 139 GKYQVLYTDYENFAILWSC 157


>BT001634-1|AAN71389.1|  451|Drosophila melanogaster RE38701p
           protein.
          Length = 451

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +2

Query: 158 KSRNFPTNLRRTANALQLNTNWKVTW*RSRTCNHRRRQEVYRRDGQAHRRRQ*SRKANS 334
           +SR+   + R+         +   ++ RSR+ +H RRQ   RRD   HR R  S ++NS
Sbjct: 309 RSRSKTPSQRKNRKLASTRRSRSSSYSRSRSRSHSRRQSSSRRD---HRGRHRSSRSNS 364


>AY058715-1|AAL13944.1|  451|Drosophila melanogaster LD45348p
           protein.
          Length = 451

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +2

Query: 158 KSRNFPTNLRRTANALQLNTNWKVTW*RSRTCNHRRRQEVYRRDGQAHRRRQ*SRKANS 334
           +SR+   + R+         +   ++ RSR+ +H RRQ   RRD   HR R  S ++NS
Sbjct: 309 RSRSKTPSQRKNRKLASTRRSRSSSYSRSRSRSHSRRQSSSRRD---HRGRHRSSRSNS 364


>AE014297-327|AAF51973.2|  648|Drosophila melanogaster CG2179-PB,
           isoform B protein.
          Length = 648

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +2

Query: 158 KSRNFPTNLRRTANALQLNTNWKVTW*RSRTCNHRRRQEVYRRDGQAHRRRQ*SRKANS 334
           +SR+   + R+         +   ++ RSR+ +H RRQ   RRD   HR R  S ++NS
Sbjct: 506 RSRSKTPSQRKNRKLASTRRSRSSSYSRSRSRSHSRRQSSSRRD---HRGRHRSSRSNS 561


>AE014297-326|AAF51972.2|  783|Drosophila melanogaster CG2179-PA,
           isoform A protein.
          Length = 783

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +2

Query: 158 KSRNFPTNLRRTANALQLNTNWKVTW*RSRTCNHRRRQEVYRRDGQAHRRRQ*SRKANS 334
           +SR+   + R+         +   ++ RSR+ +H RRQ   RRD   HR R  S ++NS
Sbjct: 641 RSRSKTPSQRKNRKLASTRRSRSSSYSRSRSRSHSRRQSSSRRD---HRGRHRSSRSNS 696


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,158,678
Number of Sequences: 53049
Number of extensions: 298052
Number of successful extensions: 977
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)