Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0707
         (429 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.2  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    20   8.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   8.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 249  SRFFHNSWGIFNILNC 296
            +R+ H  WG + + NC
Sbjct: 1292 TRYLHCLWGKYEVFNC 1307


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 374 WNVGSYKLS 400
           WN GSYK S
Sbjct: 102 WNEGSYKYS 110


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 311 FNYFTGFVYSLCNRV 355
           F+Y  G  Y +CN V
Sbjct: 150 FSYKCGIQYHICNTV 164


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 311 FNYFTGFVYSLCNRV 355
           F+Y  G  Y +CN V
Sbjct: 146 FSYKCGIQYHICNTV 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,019
Number of Sequences: 336
Number of extensions: 1944
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)