Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0704
         (421 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   3.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   3.7  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   6.4  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 417 SGVLISGIAAASLSTVGAKSIFFTMLGMM 331
           SG  +  IA   L  + A  +FF + G+M
Sbjct: 69  SGFQMQKIATKGLDLLEANRLFFFLTGVM 97


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 417 SGVLISGIAAASLSTVGAKSIFFTMLGMM 331
           SG  +  IA   L  + A  +FF + G+M
Sbjct: 69  SGFQMQKIATKGLDLLEANRLFFFLTGVM 97


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 251 SKATVAEISKEEKPSATDAE 310
           +KA + +  K+EKP  +D+E
Sbjct: 159 AKARMIDRVKKEKPEMSDSE 178


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 406 NFRNCSSIAFYSRSQVDLLHHVGN 335
           N+ + S+  F+S ++  LL  +GN
Sbjct: 309 NYPDFSAAGFFSINKTTLLQIIGN 332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,942
Number of Sequences: 336
Number of extensions: 1061
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)