Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0698
         (435 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   0.95 
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   1.7  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   2.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   2.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   3.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   3.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   3.8  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   3.8  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   6.7  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   6.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   6.7  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    20   8.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    20   8.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 292 GAKVKSVCTFEGNTLKQVQKAPDG 363
           G      C FEGN +K +    DG
Sbjct: 342 GRPATFTCNFEGNPIKTISWLKDG 365


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 247 DEVKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLE 369
           DE+   +   ++  D    K  CT EG  LK  +  PD L+
Sbjct: 30  DEILKNDRLTKNYLDCILEKGKCTPEGEELK--KDIPDALQ 68


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 365 RPSGAFWTCLRVLP 324
           R  G FW CL  +P
Sbjct: 21  RKKGRFWECLAPIP 34


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 365 RPSGAFWTCLRVLP 324
           R  G FW CL  +P
Sbjct: 21  RKKGRFWECLAPIP 34


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 147 SPAKPPTRSPRP 182
           SP  PPT SP P
Sbjct: 94  SPTTPPTPSPPP 105


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 11/51 (21%), Positives = 24/51 (47%)
 Frame = -1

Query: 369 FKTVGGLLDLLEGVAFECAYGFHLSTVSAVLFELFAGLDFISVVLKVEEVT 217
           F  +   L ++ G  +     +HL  +S + F+L    D ++   +V+ +T
Sbjct: 183 FTILNNYLTIVLGETWTSLSVYHLVEISEIHFDLCQAADDLNRYFEVQVLT 233


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 11/51 (21%), Positives = 24/51 (47%)
 Frame = -1

Query: 369 FKTVGGLLDLLEGVAFECAYGFHLSTVSAVLFELFAGLDFISVVLKVEEVT 217
           F  +   L ++ G  +     +HL  +S + F+L    D ++   +V+ +T
Sbjct: 179 FTILNNYLTIVLGETWTSLSVYHLVEISEIHFDLCQAADDLNRYFEVQVLT 229


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -1

Query: 237 LKVEEVTKLYSSPSLRSSTVGVTALAALRVIRPTPMVFMNSSKFSEEVI 91
           L+  ++  L SS     S   +  L   +VIR TP+V + S+ +  +++
Sbjct: 353 LRFGKILLLVSSTFRTISGRTIEDLFFKKVIRDTPIVAIISNMYKNQIL 401


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 247 DEVKPGEEFEEDRADGAKVKSVCTFEGNTLKQ 342
           DE+   +    +  D    K  CT EG  LK+
Sbjct: 31  DEILKNDRLTRNYLDCVLGKGKCTPEGEELKK 62


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 247 DEVKPGEEFEEDRADGAKVKSVCTFEGNTLKQ 342
           DE+   +    +  D    K  CT EG  LK+
Sbjct: 31  DEILKNDRLTRNYLDCVLGKGKCTPEGEELKK 62


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 207 SSPSLRSSTVGVTALAALRVIRPTPMVFMNS 115
           +S S+  +T+G      +R    TPM  MNS
Sbjct: 70  TSSSMGYTTIGSPISNRIRHEMATPMATMNS 100


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 247 DEVKPGEEFEEDRADGAKVKSVCTFEGNTLKQ 342
           DE+   +    +  D    K  CT EG  LK+
Sbjct: 31  DEILKNDRLTRNYIDCILGKGKCTPEGEELKR 62


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +2

Query: 251 KSSPAKSSKRTALTVLR*NPYAHSKATPSSKSRRPPTV 364
           KSS  K+     LT     P + +  T +S S   P+V
Sbjct: 139 KSSKLKNKSAPILTKTSPTPVSINNNTSTSSSASSPSV 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,975
Number of Sequences: 336
Number of extensions: 1900
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)