Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0698
(435 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual 32 0.044
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 30 0.18
SPAPB17E12.07c |sen2||tRNA-splicing endonuclease subunit Sen2|Sc... 28 0.54
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 28 0.71
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 27 1.2
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 27 1.2
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 26 2.9
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 25 5.0
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 25 5.0
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 25 5.0
SPAC9.09 |met26||homocysteine methyltransferase|Schizosaccharomy... 25 5.0
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 25 6.7
SPAC2C4.06c |||rRNA methyltransferase |Schizosaccharomyces pombe... 25 6.7
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 25 6.7
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 25 6.7
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 6.7
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 24 8.8
SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr 2|... 24 8.8
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 24 8.8
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 24 8.8
>SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 296
Score = 31.9 bits (69), Expect = 0.044
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 372 DFKTVGGLLDLLEGVAFECAYGF-HLSTVSAVLFELFAGLDFISVVLKVEEVT 217
+F T+ + D + + +C Y F H T FE AG DF S+ KV+E+T
Sbjct: 170 EFTTLPEVTDRIFSTSIDCNYTFKHFDT-----FEELAGFDFNSIYEKVKEIT 217
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.9 bits (64), Expect = 0.18
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +2
Query: 158 AANAVTPTVELRKDGDEYNLVTSSTFKTTEMKSSPAKSSKRTALTVLR*NPYAHSKATPS 337
+AN+ T T + YN TSS T+ + S+P S+ T T P +T +
Sbjct: 507 SANSTTST-SVSSTAPSYN--TSSVLPTSSVSSTPLSSANSTTATSASSTPLTSVNSTTA 563
Query: 338 SKSRRPPTVLKSLTSGNS 391
+ + P ++TS S
Sbjct: 564 TSASSTPFGNSTITSSAS 581
Score = 29.1 bits (62), Expect = 0.31
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 158 AANAVTPTVELRKDGDEYNLVTSSTFKTTEMKSSPAKSSKRTALTVLR*NPYAH-SKATP 334
+AN+ T T + YN TSS T+ + S+P S+ T T P + + T
Sbjct: 393 SANSTTST-SVSSTAPSYN--TSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTA 449
Query: 335 SSKSRRPPTVLKSLTS 382
+S S P + + S T+
Sbjct: 450 TSASSTPLSSVNSTTA 465
Score = 26.6 bits (56), Expect = 1.6
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +2
Query: 176 PTVELRKDGDEYNLVTSSTFKTTEMKSSPAKSSKRTALTVLR*NPYAHSKATPSSKSRRP 355
PT+ L++ YN TSS ++ SS A SS ++ ++ + + + A+P+S S
Sbjct: 53 PTL-LKRATTSYNYNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTS 111
Query: 356 PTVLKSLTSGNS 391
+ S + +S
Sbjct: 112 SSATSSSLASSS 123
Score = 26.2 bits (55), Expect = 2.2
Identities = 18/78 (23%), Positives = 31/78 (39%)
Frame = +2
Query: 158 AANAVTPTVELRKDGDEYNLVTSSTFKTTEMKSSPAKSSKRTALTVLR*NPYAHSKATPS 337
++N+ T TSS ++ S+P S+ T T P +T +
Sbjct: 257 SSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTT 316
Query: 338 SKSRRPPTVLKSLTSGNS 391
+ + P L S++S NS
Sbjct: 317 TSASSTP--LSSVSSANS 332
Score = 25.0 bits (52), Expect = 5.0
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +2
Query: 218 VTSSTFKTTEMKSSPAKSSKRTALTVLR*NPYAHSKATPSSKSRRPPTVLKSLTSGNS 391
+TSS+ ++ + SS SS T+ ++ + + + ATP+S + + L S + NS
Sbjct: 134 ITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSA--TSSSLSSTAASNS 189
>SPAPB17E12.07c |sen2||tRNA-splicing endonuclease subunit
Sen2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 0.54
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -1
Query: 279 LFELFAGLDFISVVLKVE-EVTKLYSSPSLRSSTVGVTALAALRVIRPTPMVFMNSSKFS 103
+ +LFA + SV L + + + + P + +T LAA R V N +KFS
Sbjct: 216 ILKLFANIVANSVALTHDYSLQQSHEDPIIEPDNKFLTELAAYFYFRQQGWVVKNGTKFS 275
Query: 102 EEVILY 85
+ +LY
Sbjct: 276 VDFLLY 281
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 27.9 bits (59), Expect = 0.71
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 265 EEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAXMTAKDV 432
EE ED G + CT + N + + D +E + GP E++ M+ DV
Sbjct: 220 EETNEDDLLGQS-PTACTTDANIDNSIPENSDKIEEVSIESSGPSEVEDEMSEYDV 274
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 27.1 bits (57), Expect = 1.2
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Frame = +2
Query: 98 SSENFDEFMKTIGVGLITRKAAN--AVTPTVELRKDGDEYNLVTSSTFKTTEMKSSPAKS 271
S+ + E + TI TR +++ +++P + DG TS T +T + S A S
Sbjct: 139 STTSITENLPTIDPTRSTRSSSHIQSLSPESKQTSDGHRPPSPTSITTTSTSIDPSVAFS 198
Query: 272 SKRTALTVLR*NPYAHSKATPSSKSRRPPTVLKSLTSGNSXLR 400
SK T T P + + + L+++ S S R
Sbjct: 199 SKSTLATTRTNAPLSRPSQPTKASPLNKFSALEAIQSARSHAR 241
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 212 NLVTSSTFKTTEMKSSPAKSSKRTALTVLR*N-PYAHSKATPSSKSRRPPTV 364
N+ + T K + SS +S+R +L N Y+HS + +S S RPP +
Sbjct: 125 NVESILTPKNPSLFSSSNAASQRGSLNTAPSNFAYSHSSSLQTSASSRPPVL 176
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 2.9
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = +2
Query: 101 SENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKSSPAKSSKR 280
S NF+E + + IT K + K+G+ ++ S +
Sbjct: 385 SGNFEEILGSESHSSITEKTRDIAKNVATWLKNGENFSSWPLPPLMDLASLSVAEPRDSQ 444
Query: 281 TALTVLR*NPYAHSKAT-PSSKSRRPPTVLKSLTSGNSXL 397
+++ + S +T PSS+S + P+ L SLTS + L
Sbjct: 445 PSVSQVNDTFVKSSDSTFPSSQSMQSPSKLHSLTSNATDL 484
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.0 bits (52), Expect = 5.0
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Frame = +2
Query: 164 NAVTPTVELRK----DGDEYNLVTSSTFKTTEMKSSPAKSSKRTALTVLR*NPYAH---S 322
++VTP+ L K + + + TSS T++ +S + S V+ NPY S
Sbjct: 176 DSVTPSASLYKQPSFNSNPAPITTSSATHTSQFSTSSSSSVNSVHTPVMVPNPYFQYNSS 235
Query: 323 KATPSSKS 346
PSS S
Sbjct: 236 MTAPSSSS 243
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 25.0 bits (52), Expect = 5.0
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Frame = +2
Query: 125 KTIGVGLITRKAANAVTPTVELRKDGDEYN-----LVTSSTFKTTEMKSSPAKSSKRTAL 289
KT +T KA NA PT D N L TSSTF+++ S + AL
Sbjct: 491 KTNYQSYLTNKARNATQPTQPPVSQVDYSNNLPPNLDTSSTFRSSASPPSAFTKAGNEAL 550
Query: 290 TVLR*NPYAHSKATPSSKSRRPPTVLKSLTSGNS 391
+V P + ++ T +S+ PT +L +GNS
Sbjct: 551 SV----PLSGARNTAASR----PT---NLAAGNS 573
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 25.0 bits (52), Expect = 5.0
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +2
Query: 170 VTPTVELRKDGDEYNLVTSSTFKTTEMKSSP--AKSSKRTALTVLR*--NPYAHSKATP- 334
+ P + +K+ E + + K + SS A+S KR A + +P A ++A
Sbjct: 204 IQPVIPEKKEKSEKKESSMTLRKRSVSPSSQNTARSPKRMATEPIEPASSPAASNQAIRR 263
Query: 335 SSKSRRPPT 361
SS+SRRPPT
Sbjct: 264 SSRSRRPPT 272
>SPAC9.09 |met26||homocysteine methyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 764
Score = 25.0 bits (52), Expect = 5.0
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2
Query: 86 YKMTSSENFDEFMKTIGVGLITR 154
+K++S++ DEF++ G+ITR
Sbjct: 140 FKLSSTKALDEFLEAKEAGIITR 162
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 24.6 bits (51), Expect = 6.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 16 RRIKNLSLKSIKLIYKNGIRRQEIQDDFL 102
R K LK + + + IR+ ++QDDF+
Sbjct: 20 RLAKTSILKFVPIAQNHRIRKMKVQDDFI 48
>SPAC2C4.06c |||rRNA methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 6.7
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 289 DGAKVKSVCTFEGNTLKQVQKAPDGLEVTY 378
D +++++C+F+ LK + P+ VTY
Sbjct: 313 DTERLENLCSFQSTILKHALQFPNCRHVTY 342
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 24.6 bits (51), Expect = 6.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 28 NLSLKSIKLIYKNGIRRQEIQDDF 99
NL L +++++NGI QDDF
Sbjct: 1815 NLQLGGTQVMHRNGISHLTSQDDF 1838
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 24.6 bits (51), Expect = 6.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 228 EEVTKLYSSPSLRSSTVGVTALAALRVIRPTPM 130
+E T +YS+ SL + G ALA L ++ TP+
Sbjct: 7 KESTIVYSALSLAQAGRGPEALALLEPLKSTPI 39
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 24.6 bits (51), Expect = 6.7
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 218 VTSSTFKTTEMKSSPAKS-SKRTALTVLR*NPYAHSKATPSSKSRRPPT 361
V KT + +S K + +T +R N ++ +TPS +++PPT
Sbjct: 72 VNFDKLKTDKFAASMFKQLNASNMITTVRSNYASNVPSTPSDSTQQPPT 120
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 24.2 bits (50), Expect = 8.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 339 LEGVAFECAYGFHLSTVSAVLFELF 265
L+GV Y FH S + +F LF
Sbjct: 1449 LDGVEMNYLYAFHFSISNRFVFSLF 1473
>SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr
2|||Manual
Length = 482
Score = 24.2 bits (50), Expect = 8.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 236 KTTEMKSSPAKSSKRTALTVLR*NPYAHSKATPSSKSRRPPTVLKS 373
K T ++ + A S R AL P + P+SK RR P+V S
Sbjct: 79 KNTNVRHTTASVSTRRALEEKSIIPATDDE--PASKKRRQPSVFNS 122
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 24.2 bits (50), Expect = 8.8
Identities = 15/82 (18%), Positives = 39/82 (47%)
Frame = +2
Query: 146 ITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKSSPAKSSKRTALTVLR*NPYAHSK 325
+ ++ N + ++ + G + + S ++T + + + A ++R + + ++
Sbjct: 340 LEQREVNVKNSSAKIVRPGTSLGVRSPSRIQSTLSSRTTTGNVRTKAANIVRPSS-SINR 398
Query: 326 ATPSSKSRRPPTVLKSLTSGNS 391
PSS ++RPP+ L+ L S
Sbjct: 399 RPPSSINQRPPSNLRILAPSRS 420
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 24.2 bits (50), Expect = 8.8
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -1
Query: 291 VSAVLFELFAGLDFISVVLKVEEVTKLYSSPSLRSSTVGVTALAAL--RVIRPTPMV 127
V+ L+ L GLD V L ++E L+ + SST AL + I PMV
Sbjct: 206 VNITLYPLLKGLDVGKVTLVLKEYCTLFITSKAYSSTCRKEFKRALVKKTIPGLPMV 262
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,675,022
Number of Sequences: 5004
Number of extensions: 33031
Number of successful extensions: 129
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 156095170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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