Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0698
(435 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50472-1|AAA93475.1| 141|Anopheles gambiae protein ( Anopheles ... 72 8e-15
AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein. 24 2.7
AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein. 24 2.7
AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein. 24 2.7
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 23 4.7
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 4.7
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 23 4.7
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 23 6.2
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 23 6.2
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 22 8.2
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 22 8.2
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 22 8.2
AY341161-1|AAR13725.1| 159|Anopheles gambiae CED6 protein. 22 8.2
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 22 8.2
AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein... 22 8.2
>U50472-1|AAA93475.1| 141|Anopheles gambiae protein ( Anopheles
gambiae putativefatty acid binding protein mRNA, partial
cds. ).
Length = 141
Score = 72.1 bits (169), Expect = 8e-15
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +2
Query: 77 GKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKS 256
GKKYKM SE FD++M +GVG++ RK N+++PTVEL K+GDEY T S +T S
Sbjct: 35 GKKYKMEKSEGFDDYMLALGVGMVLRKLGNSISPTVELVKNGDEYTFNTLSPSRTRRSSS 94
Query: 257 S 259
S
Sbjct: 95 S 95
Score = 39.5 bits (88), Expect = 5e-05
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +1
Query: 268 EFEEDRADGAKVKSVCTFEGNTLKQVQK 351
EF+E+ DG VKSVCTF+GN L QK
Sbjct: 99 EFDEETVDGRMVKSVCTFDGNKLIHEQK 126
>AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.8 bits (49), Expect = 2.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 155 KAANAVTPTVELRKDGDEYNLVTSST 232
K VTPT + GD+ N +ST
Sbjct: 89 KTGTGVTPTSSIASSGDDTNSSNNST 114
>AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.8 bits (49), Expect = 2.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 155 KAANAVTPTVELRKDGDEYNLVTSST 232
K VTPT + GD+ N +ST
Sbjct: 89 KTGTGVTPTSSIASSGDDTNSSNNST 114
>AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.8 bits (49), Expect = 2.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 155 KAANAVTPTVELRKDGDEYNLVTSST 232
K VTPT + GD+ N +ST
Sbjct: 89 KTGTGVTPTSSIASSGDDTNSSNNST 114
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 4.7
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Frame = +2
Query: 221 TSSTFKTTEMKSSPAKSSKRTALTVLR*NPY--------AHSKATPSSKSRRPPT 361
T++TF TT S+P S+ T T+ P A + T S RPPT
Sbjct: 128 TTTTFPTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPRPPT 182
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 4.7
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Frame = +2
Query: 221 TSSTFKTTEMKSSPAKSSKRTALTVLR*NPY--------AHSKATPSSKSRRPPT 361
T++TF TT S+P S+ T T+ P A + T S RPPT
Sbjct: 128 TTTTFPTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPRPPT 182
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 23.0 bits (47), Expect = 4.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = -1
Query: 297 STVSAVLFELFAGLDFISVV----LKVEEVTKLYSSPSLRSST 181
STV ++ AG+DFISV L +E +L + L +S+
Sbjct: 72 STVPGLVAAKVAGIDFISVYAPPSLSPQEYERLLEAVELEASS 114
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 22.6 bits (46), Expect = 6.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 223 GD*IVFVTILTELHGRGDRVGGFAGDQTHA 134
GD ++ ++ + G D G FAGD+TH+
Sbjct: 974 GDDMMMESVDLTIGGSDD--GSFAGDKTHS 1001
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 22.6 bits (46), Expect = 6.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 223 GD*IVFVTILTELHGRGDRVGGFAGDQTHA 134
GD ++ ++ + G D G FAGD+TH+
Sbjct: 972 GDDMMMESVDLTIGGSDD--GSFAGDKTHS 999
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 22.2 bits (45), Expect = 8.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 221 TSSTFKTTEMKSSPAKSSKRTALTVLR*NP 310
T++TF TT S+P S+ T T+ P
Sbjct: 128 TTTTFPTTTTTSAPTTPSQWTDPTITTTTP 157
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 22.2 bits (45), Expect = 8.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 221 TSSTFKTTEMKSSPAKSSKRTALTVLR*NP 310
T++TF TT S+P S+ T T+ P
Sbjct: 128 TTTTFPTTTTTSAPTTPSQWTDPTITTTTP 157
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 22.2 bits (45), Expect = 8.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 221 TSSTFKTTEMKSSPAKSSKRTALTVLR*NP 310
T++TF TT S+P S+ T T+ P
Sbjct: 128 TTTTFPTTTTTSAPTTPSQWTDPTITTTTP 157
>AY341161-1|AAR13725.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 22.2 bits (45), Expect = 8.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +2
Query: 155 KAANAVTPTVELRKDGDEYNLVTSST 232
K TPT + GD+ N +ST
Sbjct: 89 KTGTGATPTSSIASSGDDTNSSNNST 114
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 22.2 bits (45), Expect = 8.2
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 372 DFKTVGGLLDLLEGVAFECAYGFHLSTVSAVLFELFAGLDFISVVLK 232
D +T L L G +C ++S V + LF G ISV+LK
Sbjct: 699 DLRTCKTLKGTLTGA--DCDKPEYVSDVFLMSIVLFLGTYIISVILK 743
>AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 695
Score = 22.2 bits (45), Expect = 8.2
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 228 EEVTKLYSSPSLRSS 184
E V K+YSS SLR S
Sbjct: 128 ENVIKVYSSKSLRKS 142
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,001
Number of Sequences: 2352
Number of extensions: 8053
Number of successful extensions: 32
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -