Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0698
(435 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 71 5e-13
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 67 4e-12
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 66 8e-12
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 64 6e-11
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 57 5e-09
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 57 5e-09
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 37 0.007
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 36 0.017
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 36 0.017
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 36 0.017
U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding p... 31 0.27
U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding p... 31 0.27
Z48621-7|CAA88546.1| 770|Caenorhabditis elegans Hypothetical pr... 29 1.9
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 29 1.9
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 29 1.9
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 28 2.5
AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium bind... 28 2.5
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 28 3.4
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 27 4.4
AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical... 27 4.4
AF000266-5|AAC71172.1| 370|Caenorhabditis elegans Hypothetical ... 27 4.4
AF000266-4|ABB51177.1| 403|Caenorhabditis elegans Hypothetical ... 27 4.4
Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 70.5 bits (165), Expect = 5e-13
Identities = 32/61 (52%), Positives = 46/61 (75%)
Frame = +2
Query: 68 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 247
+F+G+ +K+ +ENFDE+MK IGVGLITRKAA + P +E+R DG+ +N STFK T+
Sbjct: 6 DFIGR-WKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTK 64
Query: 248 M 250
+
Sbjct: 65 L 65
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 67.3 bits (157), Expect = 4e-12
Identities = 29/61 (47%), Positives = 46/61 (75%)
Frame = +2
Query: 68 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 247
EF+G+ +K+ SENF+E++K IGVGL+ RKAA+ +PT+E++ DGD ++ STFK +
Sbjct: 6 EFIGR-WKLVHSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNK 64
Query: 248 M 250
+
Sbjct: 65 L 65
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 66.5 bits (155), Expect = 8e-12
Identities = 32/64 (50%), Positives = 46/64 (71%)
Frame = +2
Query: 59 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 238
+ EFVG+ +K+ SENF+E+MK +GVGLITRKAA + PT+E++ +GD + STFK
Sbjct: 1 MSQEFVGR-WKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFK 59
Query: 239 TTEM 250
T +
Sbjct: 60 NTTL 63
Score = 32.7 bits (71), Expect = 0.12
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 256 KPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 351
K G+EF+E DG VKSV FE +QK
Sbjct: 66 KLGQEFDETTPDGRTVKSVVNFENGKFIHIQK 97
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 63.7 bits (148), Expect = 6e-11
Identities = 27/62 (43%), Positives = 48/62 (77%)
Frame = +2
Query: 68 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 247
+FVG+ +K+ SENF++++K +GVGL+ RKAA A PT+E++ +G+++++ STFK T
Sbjct: 5 QFVGR-WKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTT 63
Query: 248 MK 253
++
Sbjct: 64 LE 65
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 262 GEEFEEDRADGAKVKSVCTFEGNTLKQVQK 351
G EF+E DG + KS T E + VQK
Sbjct: 69 GVEFDETTPDGRQFKSTITIEDGKVVHVQK 98
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 57.2 bits (132), Expect = 5e-09
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +2
Query: 59 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 238
I+ + VGK + SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 3 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 61
Query: 239 TTEMK 253
+K
Sbjct: 62 NYTLK 66
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 57.2 bits (132), Expect = 5e-09
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +2
Query: 59 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 238
I+ + VGK + SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 18 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 76
Query: 239 TTEMK 253
+K
Sbjct: 77 NYTLK 81
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +2
Query: 56 SIKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAAN--AVTPTVELRKDGDEYNLVTSS 229
S+ +F G+ Y++ SENFDEF+ + GV R+ +T + ++ +YN+ +
Sbjct: 2 SVPDKFFGR-YQLDKSENFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLT 60
Query: 230 TFKTTEMKS 256
+ K T ++
Sbjct: 61 SKKNTNYQA 69
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 35.5 bits (78), Expect = 0.017
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +2
Query: 98 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKSSPAKSSK 277
SSE ++ + IGV L RK +A P DG+ V +ST K E K P K K
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPK 61
Query: 278 R 280
+
Sbjct: 62 Q 62
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 35.5 bits (78), Expect = 0.017
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +2
Query: 98 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKSSPAKSSK 277
SSE ++ + IGV L RK +A P DG+ V +ST K E K P K K
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPK 61
Query: 278 R 280
+
Sbjct: 62 Q 62
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 35.5 bits (78), Expect = 0.017
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +2
Query: 98 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKSSPAKSSK 277
SSE ++ + IGV L RK +A P DG+ V +ST K E K P K K
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPK 61
Query: 278 R 280
+
Sbjct: 62 Q 62
>U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding
protein protein 3,isoform b protein.
Length = 150
Score = 31.5 bits (68), Expect = 0.27
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 59 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSST 232
I +F GK Y + SENFDEF+ GV R+ + L K+ +YN+ ++
Sbjct: 8 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 66
Query: 233 FKTT 244
K T
Sbjct: 67 KKNT 70
>U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding
protein protein 3,isoform a protein.
Length = 165
Score = 31.5 bits (68), Expect = 0.27
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 59 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSST 232
I +F GK Y + SENFDEF+ GV R+ + L K+ +YN+ ++
Sbjct: 23 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 81
Query: 233 FKTT 244
K T
Sbjct: 82 KKNT 85
>Z48621-7|CAA88546.1| 770|Caenorhabditis elegans Hypothetical
protein R07B1.9 protein.
Length = 770
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 384 PDVSDFKTVGGLLDLLEGVAFEC-AYGFHLSTVSAVLFELFAGLDFISVVLKVEEVTKL 211
P ++ +L + GV C F LST+SAV+ + LDF S+ +V + K+
Sbjct: 292 PSITSTDAPRYILVVAHGVLLGCFGIAFFLSTLSAVIVGTYLHLDFHSMHTEVNKSIKI 350
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 86 YKMTSSENFDEFMKTIGVGLITRKAANAVT 175
+ + SENFDE++ G G TRK T
Sbjct: 30 FDLDHSENFDEYLTAKGYGWFTRKLVTFAT 59
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 86 YKMTSSENFDEFMKTIGVGLITRKAANAVT 175
+ + SENFDE++ G G TRK T
Sbjct: 28 FDLDHSENFDEYLTAKGYGWFTRKLVTFAT 57
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 197 DGDEYNLVTSSTFKTTEMKSSPAKSSKRTALTVLR*NPYAHSKATPSSKSRRPPTVLKSL 376
+GD + V+SST + S AK + ++ + +P + +T S + R S+
Sbjct: 484 EGDVASTVSSSTSRNRRPSPSVAKKTSPPSIYAITSSPAKRASSTASGPTARRQNSTSSV 543
Query: 377 TSGNS 391
TS S
Sbjct: 544 TSTTS 548
>AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform d protein.
Length = 679
Score = 28.3 bits (60), Expect = 2.5
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +2
Query: 218 VTSSTFKTTEMKSSPAKSSKRTALTVLR*NPYAHSKATPS----SKSRRPPTVLKSL 376
VT++T TT + +S S+ TV P A S ATP + +RRP T K L
Sbjct: 583 VTTTTVSTTTITTSTPPSTTSPTTTV---TPVATSSATPKPSKRTTTRRPMTASKEL 636
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 221 TSSTFKTTEMKSSPAKSSKRTALTVLR*NPYAHSKATPSSKSRRPPTVLKSLTS 382
T++ +TTE S+ +K++K+ +T + + +TP S + TV TS
Sbjct: 561 TTTVIQTTETPSTKSKTTKKVKVTTTTVSTTTITTSTPPSTTSPTTTVTPVATS 614
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 158 AANAVTPTVELRKDGDEYNLVTSSTFKTTEMKSSPAKSSKR 280
A N+++ T E R + D Y V S F + E+KS PAK+ R
Sbjct: 213 ATNSLSKT-EFRDNIDHYRAVLHS-FLSVELKSLPAKTQPR 251
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 27.5 bits (58), Expect = 4.4
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -1
Query: 252 FISVVLKVEEVTKLYSSPSLRSSTVGVTALAALRVIRPTPMVFMNSS 112
F S++ K VT S +L SST + +A+ I PT +F NSS
Sbjct: 845 FGSILDKETHVTTTPVSVALPSSTDSTQSKSAIPTIAPTMSLFGNSS 891
>AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical
protein F16B4.11 protein.
Length = 440
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 131 IGVGLITRKAANAVTPTVELRKDGDEYNL 217
+ + L+ KA N + V +RKDGD NL
Sbjct: 166 VDISLLVDKATNYILNPVLIRKDGDMSNL 194
>AF000266-5|AAC71172.1| 370|Caenorhabditis elegans Hypothetical
protein W08F4.8a protein.
Length = 370
Score = 27.5 bits (58), Expect = 4.4
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 247 DEVKPGEEFEEDRADGAKVKSVCTFEGNT-LKQVQKAPDGLEVTYVREFGPEEMKAXMTA 423
DEVK E+ RA + ++ E ++++ AP G++ V E PEEM+ A
Sbjct: 255 DEVKAFEDRLRTRAQTKRDAAMEEAEAEEKAERMKSAPGGIDPQEVFEQLPEEMRKCFEA 314
Query: 424 KDV 432
D+
Sbjct: 315 HDI 317
>AF000266-4|ABB51177.1| 403|Caenorhabditis elegans Hypothetical
protein W08F4.8b protein.
Length = 403
Score = 27.5 bits (58), Expect = 4.4
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 247 DEVKPGEEFEEDRADGAKVKSVCTFEGNT-LKQVQKAPDGLEVTYVREFGPEEMKAXMTA 423
DEVK E+ RA + ++ E ++++ AP G++ V E PEEM+ A
Sbjct: 288 DEVKAFEDRLRTRAQTKRDAAMEEAEAEEKAERMKSAPGGIDPQEVFEQLPEEMRKCFEA 347
Query: 424 KDV 432
D+
Sbjct: 348 HDI 350
>Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical
protein K05D4.3 protein.
Length = 321
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 237 LKVEEVTKLYSSPSLRSSTVGVTALAALRV 148
LK V KL+ P +SS VGV A +R+
Sbjct: 286 LKSRNVFKLFCCPFSKSSQVGVVAQPVMRI 315
>Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical
protein F52F12.2 protein.
Length = 370
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 96 LPPRTLMSS*RPSAWV*SPAKPPTRSPR 179
LPP T +SS P+ +P PTRSP+
Sbjct: 299 LPPSTTLSSTPPTISPSAPTLLPTRSPK 326
>Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical protein
F17C11.10 protein.
Length = 1101
Score = 26.6 bits (56), Expect = 7.8
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
Frame = +2
Query: 107 NFDEFMKTIGVGLITRKAANAVTPTVE-LRKDGDEYNLVTSSTFK---TTEMKSSPAKSS 274
N E T + L RKA A +PTVE L +D +SS + M S P +
Sbjct: 879 NDTEIWPTKRIALAARKAQKAPSPTVESLNEDQTNDGDESSSRYNLNMDVSMMSQPVQPL 938
Query: 275 KRTALTVLR*NPYAH----SKATPSSKSRRPPTVLKSLTSGNSXLRR 403
+R A NP+A SK ++ S+ ++ L S ++ R+
Sbjct: 939 ERLAK-----NPFAKGSDTSKIDSAASSQASLSIFDQLESTSNDQRK 980
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,332,280
Number of Sequences: 27780
Number of extensions: 188956
Number of successful extensions: 756
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -