Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0698
         (435 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    80   1e-17
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    36   1e-04
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    36   2e-04
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   2.0  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   2.6  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   2.6  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   2.6  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   7.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.9  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 79.8 bits (188), Expect = 1e-17
 Identities = 34/62 (54%), Positives = 49/62 (79%)
 Frame = +2

Query: 68  EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 247
           +F+GK+YK+ SSENFD+FMK +GVG++TRK  ++V+P VEL ++   Y L T+S FK TE
Sbjct: 3   DFLGKRYKLYSSENFDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTE 62

Query: 248 MK 253
           +K
Sbjct: 63  IK 64



 Score = 63.7 bits (148), Expect = 9e-13
 Identities = 33/59 (55%), Positives = 37/59 (62%)
 Frame = +1

Query: 256 KPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAXMTAKDV 432
           K GEEFEE+  DG KVKSVCT +GN L QVQK     + T  REF   EMKA M   D+
Sbjct: 66  KLGEEFEEETVDGRKVKSVCTLDGNKLIQVQKGEK--QTTIEREFSSTEMKAIMKVDDI 122


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 36.3 bits (80), Expect = 1e-04
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +2

Query: 65  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSS 229
           ++F GK ++  S  NF+EF K +G   +         P+ EL K+GDE+   +SS
Sbjct: 2   VQFEGK-FQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSS 54


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 35.9 bits (79), Expect = 2e-04
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = +2

Query: 68  EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSS 229
           +F GK ++  S  NF+EF K +G   +         P+ EL K+GDE+   +SS
Sbjct: 1   QFEGK-FQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSS 52


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -1

Query: 252 FISVVLKVEEVTKLYSSPSLRSSTV 178
           FIS+++  +E+  + +SP L + T+
Sbjct: 9   FISLIILNDEIYNIIASPQLNNPTL 33


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 313 CTFEGNTLKQVQKAPDGL 366
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 313 CTFEGNTLKQVQKAPDGL 366
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 313 CTFEGNTLKQVQKAPDGL 366
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 282 VLFELFAGLDFISVVLKVEEVTKL 211
           V FEL +    I+ V+ +E++TKL
Sbjct: 78  VYFELLSPNRTINSVVYIEQLTKL 101


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +2

Query: 122 MKTIGVGLITRKAANAVTPTVELRKDGDEYN 214
           MKTI  G    +    V    E  K G EY+
Sbjct: 513 MKTIKKGSFVTQYVGEVITNEEAEKRGKEYD 543


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,960
Number of Sequences: 438
Number of extensions: 2156
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)