Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0684
         (428 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    25   1.1  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   3.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.1  

>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -3

Query: 285 WNSLCCPR--IHRHFNSSQ*QRTRNFGKHSIDTAASTSTCHTLQTST 151
           +  +CCP+      F+++Q        KH +   A+TST  T  T+T
Sbjct: 114 YEEVCCPKNAFPEEFHATQ------VAKHDLSMGATTSTTSTTATTT 154


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 15/59 (25%), Positives = 29/59 (49%)
 Frame = -1

Query: 206 IASILQHPQVRVTHFKRQPLNLC**FTLKSRRNNRPKAHDQLNNNEKAKHRSTKRNPKK 30
           +A +LQ  Q +    +RQP       T + ++  + + H Q +N  +A+ R   RN ++
Sbjct: 68  VAGMLQQQQQQ----QRQPQRQAVVGTQQQQQRRQQQQHQQRSNATQAQRREQLRNEQR 122


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -1

Query: 251  ISTRHNNNELEILVN--IASILQHPQVRVTHFKRQPLNLC**FTLKSRRNNRPKAHDQLN 78
            IS+ H  NELE+  +  +A  L    ++  +     +     FT+     N+ K + Q+ 
Sbjct: 1097 ISSEHGENELELTPDDILADGLLKKGIKEHNQLEVAIGDGMEFTIHGDLKNKAKKNKQIM 1156

Query: 77   NNEK 66
            NN K
Sbjct: 1157 NNSK 1160


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,591
Number of Sequences: 2352
Number of extensions: 8018
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)