Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0676
(413 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 35 0.020
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 34 0.035
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 34 0.035
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 34 0.035
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 33 0.062
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.062
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.062
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 33 0.062
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 33 0.062
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 32 0.14
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 31 0.25
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 31 0.44
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 29 1.0
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 29 1.0
Z68750-4|CAA92968.3| 256|Caenorhabditis elegans Hypothetical pr... 29 1.3
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 29 1.8
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 29 1.8
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 29 1.8
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 27 4.1
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 5.4
U58746-5|AAB00625.1| 310|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 27 7.1
U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical pr... 27 7.1
U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical pr... 27 7.1
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 27 7.1
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 27 7.1
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 27 7.1
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 27 7.1
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 27 7.1
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 26 9.4
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 26 9.4
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 26 9.4
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 26 9.4
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 26 9.4
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 26 9.4
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 26 9.4
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 35.1 bits (77), Expect = 0.020
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTA 342
+ + K+KF+V LDVQ F P+EI VK +
Sbjct: 27 VHNTKEKFEVGLDVQFFTPKEIEVKVS 53
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 34.3 bits (75), Expect = 0.035
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTADR 348
I +D+ KF V LDV HF PE + +K R
Sbjct: 1 IVNDESKFSVQLDVSHFKPENLKIKLDGR 29
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 34.3 bits (75), Expect = 0.035
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTADR 348
I +D+ KF V LDV HF PE + +K R
Sbjct: 48 IVNDESKFSVQLDVSHFKPENLKIKLDGR 76
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 34.3 bits (75), Expect = 0.035
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTADR 348
I +D+ KF V LDV HF PE + +K R
Sbjct: 47 IVNDESKFSVQLDVSHFKPENLKIKLDGR 75
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 33.5 bits (73), Expect = 0.062
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTADR 348
I +D+ KF V LDV HF PE++ ++ R
Sbjct: 39 IVNDESKFSVQLDVSHFKPEDLKIELDGR 67
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.062
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTADR 348
I +D+ KF V LDV HF PE++ ++ R
Sbjct: 47 IVNDESKFSVQLDVSHFKPEDLKIELDGR 75
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.062
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTADR 348
I +D+ KF V LDV HF PE++ ++ R
Sbjct: 47 IVNDESKFSVQLDVSHFKPEDLKIELDGR 75
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 33.5 bits (73), Expect = 0.062
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTADR 348
I +D+ KF V LDV HF PE++ ++ R
Sbjct: 48 IVNDESKFSVQLDVSHFKPEDLKIELDGR 76
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.062
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTADR 348
I +D+ KF V LDV HF PE++ ++ R
Sbjct: 47 IVNDESKFSVQLDVSHFKPEDLKIELDGR 75
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 32.3 bits (70), Expect = 0.14
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTADR 348
I + DKF VNL+V +F PEE+ V R
Sbjct: 45 IMNSNDKFAVNLNVSNFKPEELKVNLEGR 73
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 31.5 bits (68), Expect = 0.25
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTAD 345
+ +D +F V++D F PEEI VKT D
Sbjct: 107 VVNDDRRFAVDMDCYQFRPEEIQVKTLD 134
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEE 324
I +D+ KF V LDV HF PE+
Sbjct: 2 IVNDESKFSVQLDVSHFKPED 22
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTADRL 351
+ D D F+V L+ +F P+EI VK L
Sbjct: 27 VLDDDDHFEVGLEAHNFLPKEIEVKNIGEL 56
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTADRL 351
+ D D F+V L+ +F P+EI VK L
Sbjct: 27 VLDDDDHFEVGLEAHNFLPKEIEVKNIGEL 56
>Z68750-4|CAA92968.3| 256|Caenorhabditis elegans Hypothetical
protein K01A6.5 protein.
Length = 256
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 398 TMLDLSSPRVCLQPRCSRSAVLTEISSGAK 309
T L+++ P + QP+CSR + +TE+ K
Sbjct: 32 TTLEITPPGITPQPQCSRQSRMTEVQQKRK 61
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 265 KSDKDKFQVNLDVQHFAPEEISVKTAD 345
+SD ++ DV ++ PEE++VKT D
Sbjct: 22 ESDGKTLRLRFDVANYKPEEVTVKTID 48
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 265 KSDKDKFQVNLDVQHFAPEEISVKTAD 345
+SD ++ DV ++ PEE++VKT D
Sbjct: 119 ESDGKTLRLRFDVANYKPEEVTVKTID 145
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 265 KSDKDKFQVNLDVQHFAPEEISVKTAD 345
+SD ++ DV ++ PEE++VKT D
Sbjct: 133 ESDGKTLRLRFDVANYKPEEVTVKTID 159
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 283 FQVNLDVQHFAPEEISVKTAD 345
F + +DV HF PEEI V D
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTD 124
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 283 FQVNLDVQHFAPEEISVKTAD 345
F + +DV HF PEEI V D
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTD 124
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
F29G6.3c protein.
Length = 1453
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 332 LKRRTGYIVVEGKHEEKKDQAWLH 403
L R+ GYI V KHE KK+ + H
Sbjct: 1132 LDRQHGYIPVAAKHEAKKNVLYEH 1155
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
F29G6.3b protein.
Length = 1785
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 332 LKRRTGYIVVEGKHEEKKDQAWLH 403
L R+ GYI V KHE KK+ + H
Sbjct: 1132 LDRQHGYIPVAAKHEAKKNVLYEH 1155
>U58746-5|AAB00625.1| 310|Caenorhabditis elegans Hypothetical
protein R05G6.4 protein.
Length = 310
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +1
Query: 106 RN*ASSSPHGSTF-RLGADSGRFSQCCS--RPPCEQRILPP 219
R A +S +G+ RLGADS + CCS PC ++ P
Sbjct: 20 RRDAKASGYGTLHARLGADSIKEFHCCSLTLQPCRNPVISP 60
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVK 336
+ + +KF+V LD F P +I VK
Sbjct: 27 VTNTSEKFEVGLDAGFFGPNDIDVK 51
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVK 336
+ + +KF+V LD F P +I VK
Sbjct: 27 VTNTSEKFEVGLDAGFFGPNDIDVK 51
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 323 KSLLKRRTGYIVVEGKHEEKKDQA 394
+S +RR GYI GKH + DQA
Sbjct: 28 RSCGRRRVGYITSWGKHPFRDDQA 51
>U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical
protein ZK1127.9e protein.
Length = 604
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 113 ERPRRLMDQHFGLGLTPEDFLSAA 184
E+P+ L+DQ G G +PE SAA
Sbjct: 37 EKPKALIDQENGGGASPEPVQSAA 60
>U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical
protein ZK1127.9c protein.
Length = 693
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 113 ERPRRLMDQHFGLGLTPEDFLSAA 184
E+P+ L+DQ G G +PE SAA
Sbjct: 37 EKPKALIDQENGGGASPEPVQSAA 60
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 113 ERPRRLMDQHFGLGLTPEDFLSAA 184
E+P+ L+DQ G G +PE SAA
Sbjct: 258 EKPKALIDQENGGGASPEPVQSAA 281
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 113 ERPRRLMDQHFGLGLTPEDFLSAA 184
E+P+ L+DQ G G +PE SAA
Sbjct: 249 EKPKALIDQENGGGASPEPVQSAA 272
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTADR 348
I ++ KF +NL+V F PE++ + R
Sbjct: 43 IVNNDQKFAINLNVSQFKPEDLKINLDGR 71
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVK 336
+ + +KF+V LD F P +I VK
Sbjct: 27 VTNTSEKFEVGLDAGFFGPNDIDVK 51
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTADR 348
I ++ KF +NL+V F PE++ + R
Sbjct: 43 IVNNDQKFAINLNVSQFKPEDLKINLDGR 71
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 274 KDKFQVNLDVQHFAPEEISVK 336
+D F+V L+ +F P EI VK
Sbjct: 30 EDHFEVGLEAHNFLPNEIDVK 50
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISV 333
I ++ KF +NL+V F PE++ +
Sbjct: 43 IVNNDQKFAINLNVSQFKPEDLKI 66
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISV 333
I ++ KF +NL+V F PE++ +
Sbjct: 43 IVNNDQKFAINLNVSQFKPEDLKI 66
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTAD 345
+ ++ ++ V++DV F PEE+ V D
Sbjct: 50 VVNNDQEYNVSVDVSQFEPEELKVNIVD 77
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISVKTAD 345
+ ++ ++ V++DV F PEE+ V D
Sbjct: 49 VVNNDQEYNVSVDVSQFEPEELKVNIVD 76
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISV 333
I ++ KF +NL+V F PE++ +
Sbjct: 43 IVNNDQKFAINLNVSQFKPEDLKI 66
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 262 IKSDKDKFQVNLDVQHFAPEEISV 333
I ++ KF +NL+V F PE++ +
Sbjct: 44 IVNNDQKFAINLNVSQFKPEDLKI 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,895,851
Number of Sequences: 27780
Number of extensions: 168510
Number of successful extensions: 388
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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