Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0674
(436 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 25 0.31
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 25 0.31
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 25 0.31
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 25 0.41
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 0.95
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 3.8
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 3.8
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 21 5.1
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 21 6.7
AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein. 21 6.7
AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory recept... 20 8.9
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 25.0 bits (52), Expect = 0.31
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 121 VENQPSVTTDSTRKQSQGNVHPSVLSGAD---SLTSSTNSFADARTQDS 258
+ QP VT+ S Q+ ++ P+V D S+ S + D+RT S
Sbjct: 116 LNTQPPVTSSSNILQNLADITPNVTPNCDVKSSVCSPGSGHQDSRTSPS 164
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 25.0 bits (52), Expect = 0.31
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 121 VENQPSVTTDSTRKQSQGNVHPSVLSGAD---SLTSSTNSFADARTQDS 258
+ QP VT+ S Q+ ++ P+V D S+ S + D+RT S
Sbjct: 116 LNTQPPVTSSSNILQNLADITPNVTPNCDVKSSVCSPGSGHQDSRTSPS 164
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 25.0 bits (52), Expect = 0.31
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 121 VENQPSVTTDSTRKQSQGNVHPSVLSGAD---SLTSSTNSFADARTQDS 258
+ QP VT+ S Q+ ++ P+V D S+ S + D+RT S
Sbjct: 116 LNTQPPVTSSSNILQNLADITPNVTPNCDVKSSVCSPGSGHQDSRTSPS 164
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 24.6 bits (51), Expect = 0.41
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 361 FLNVKKSFIFSLLNGTS 311
F +VKKS IFS+LN S
Sbjct: 295 FFHVKKSTIFSILNTVS 311
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 23.4 bits (48), Expect = 0.95
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +3
Query: 96 NRQFCGRCC*KSAQCHDRFYKKTVPGQCASFC 191
N+ F C C D + VPG+C + C
Sbjct: 703 NKCFTMEC--PQVTCPDNMKLEKVPGECCAIC 732
Score = 21.8 bits (44), Expect = 2.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 121 QHLPQNCRLKVEAYRPETRDH 59
+++PQ C +AY P +R H
Sbjct: 743 RNVPQKCIFNGQAYFPGSRFH 763
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.4 bits (43), Expect = 3.8
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 94 STDN-SAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSLTS 219
S DN + G + + + D +Q P LSG SLTS
Sbjct: 653 SDDNLGSCGSMGDAHTPPEDDAESLNQSISSPGALSGLSSLTS 695
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.4 bits (43), Expect = 3.8
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 94 STDN-SAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSLTS 219
S DN + G + + + D +Q P LSG SLTS
Sbjct: 545 SDDNLGSCGSMGDAHTPPEDDAESLNQSISSPGALSGLSSLTS 587
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 21.0 bits (42), Expect = 5.1
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = +1
Query: 280 QQSLRRYTLGMMCHSIRRI*KTSSHSEKV 366
QQ + RY +C+ ++R + + +E +
Sbjct: 237 QQIIARYNFERLCNKLKRATRFNDFNEAI 265
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 20.6 bits (41), Expect = 6.7
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -3
Query: 191 TEGCTLPW 168
TEGC PW
Sbjct: 72 TEGCDYPW 79
>AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein.
Length = 257
Score = 20.6 bits (41), Expect = 6.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 128 ISPVSRQILQENSPRAMCILLFSP 199
+SP +LQ+N R + IL +P
Sbjct: 7 VSPHKINVLQQNDRREIIILRKNP 30
>AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory receptor
candidate 33 protein.
Length = 321
Score = 20.2 bits (40), Expect = 8.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 404 QNGNTFLYXCFYNT 363
+N FLY CF++T
Sbjct: 139 ENYCQFLYNCFHST 152
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,551
Number of Sequences: 336
Number of extensions: 2346
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9670396
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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