Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0674
(436 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 0.71
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 27 1.2
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 27 1.2
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 27 1.2
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 27 1.2
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 27 1.2
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 27 1.2
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 1.2
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 27 1.2
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 27 1.2
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 27 1.2
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 27 1.2
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 27 1.2
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 27 1.2
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 2.9
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 3.8
SPAC3A11.07 |||NADH dehydrogenase|Schizosaccharomyces pombe|chr ... 25 3.8
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 25 3.8
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 25 5.0
SPBC1A4.10c |pmc1|SPBP23A10.01c, med14|mediator complex subunit ... 25 5.0
SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|ch... 25 6.7
SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3 |Schizos... 25 6.7
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 24 8.8
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 24 8.8
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 0.71
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + ++T+ S S SVL+ + +
Sbjct: 3193 TSSSVLNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPI 3252
Query: 214 TSST 225
TSST
Sbjct: 3253 TSST 3256
Score = 27.5 bits (58), Expect = 0.94
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ VV + +T+ +T S SVL+ + ++
Sbjct: 3265 TSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAI 3324
Query: 214 TSST 225
TSST
Sbjct: 3325 TSST 3328
Score = 27.5 bits (58), Expect = 0.94
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + ++T+ S S SVL+ + +
Sbjct: 3313 TSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSSSILNSSTPVTSSSVLNSSTPI 3372
Query: 214 TSST 225
TSST
Sbjct: 3373 TSST 3376
Score = 27.1 bits (57), Expect = 1.2
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + +T+ S S SVL+ + ++
Sbjct: 961 TSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTAI 1020
Query: 214 TSST 225
TSST
Sbjct: 1021 TSST 1024
Score = 26.6 bits (56), Expect = 1.6
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + +T+ S S SVL+ + +
Sbjct: 721 TSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPI 780
Query: 214 TSST 225
TSST
Sbjct: 781 TSST 784
Score = 26.6 bits (56), Expect = 1.6
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + +T+ S S SVL+ + +
Sbjct: 1957 TSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTPI 2016
Query: 214 TSST 225
TSST
Sbjct: 2017 TSST 2020
Score = 26.6 bits (56), Expect = 1.6
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 82 TLQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSLTSST 225
TL ST ++ V+ + ++T+ S S SVL+ + +TSST
Sbjct: 3161 TLNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTPITSST 3208
Score = 26.2 bits (55), Expect = 2.2
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + +T+ + S SVL+ + ++
Sbjct: 649 TSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTAI 708
Query: 214 TSST 225
TSST
Sbjct: 709 TSST 712
Score = 26.2 bits (55), Expect = 2.2
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + ++T+ + S SVL+ + +
Sbjct: 673 TSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPI 732
Query: 214 TSST 225
TSST
Sbjct: 733 TSST 736
Score = 26.2 bits (55), Expect = 2.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 85 LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSLTSST 225
L ST ++ VV S+T+ S S SVL+ + +TSST
Sbjct: 2406 LNSSTPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTPITSST 2452
Score = 26.2 bits (55), Expect = 2.2
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + +T+ + S SVL+ + +
Sbjct: 2833 TSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPI 2892
Query: 214 TSST 225
TSST
Sbjct: 2893 TSST 2896
Score = 26.2 bits (55), Expect = 2.2
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + ++T+ S S SVL+ + ++
Sbjct: 3061 TSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTAI 3120
Query: 214 TSST 225
TSS+
Sbjct: 3121 TSSS 3124
Score = 25.4 bits (53), Expect = 3.8
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + +T+ + S SVL+ + +
Sbjct: 517 TSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPI 576
Query: 214 TSST 225
TSST
Sbjct: 577 TSST 580
Score = 25.4 bits (53), Expect = 3.8
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + +T+ + S SVL+ + +
Sbjct: 1285 TSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPI 1344
Query: 214 TSST 225
TSST
Sbjct: 1345 TSST 1348
Score = 25.4 bits (53), Expect = 3.8
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ VV + +T+ + S SVL+ + +
Sbjct: 1549 TSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 1608
Query: 214 TSST 225
TSST
Sbjct: 1609 TSST 1612
Score = 25.4 bits (53), Expect = 3.8
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + +T+ + S SVL+ + +
Sbjct: 1765 TSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPI 1824
Query: 214 TSST 225
TSST
Sbjct: 1825 TSST 1828
Score = 25.4 bits (53), Expect = 3.8
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + +T+ + S SVL+ + +
Sbjct: 2629 TSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPI 2688
Query: 214 TSST 225
TSST
Sbjct: 2689 TSST 2692
Score = 25.4 bits (53), Expect = 3.8
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + +T+ + S SVL+ + +
Sbjct: 2857 TSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPI 2916
Query: 214 TSST 225
TSST
Sbjct: 2917 TSST 2920
Score = 25.4 bits (53), Expect = 3.8
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T L ST ++ V+ + +T+ + S SVL+ + +
Sbjct: 2953 TSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPI 3012
Query: 214 TSST 225
TSST
Sbjct: 3013 TSST 3016
Score = 25.4 bits (53), Expect = 3.8
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S IL + L ST ++ VV + +T+ +T S SVL+ + ++
Sbjct: 3121 TSSSILNSSTPITSSSILNSSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAI 3180
Query: 214 TSST 225
TSS+
Sbjct: 3181 TSSS 3184
Score = 25.0 bits (52), Expect = 5.0
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S ++ T L ST ++ V+ + +T+ S S SVL+ + +
Sbjct: 1201 TSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPI 1260
Query: 214 TSST 225
TSST
Sbjct: 1261 TSST 1264
Score = 25.0 bits (52), Expect = 5.0
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ VV + +T+ + S SVL+ + +
Sbjct: 2485 TSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPI 2544
Query: 214 TSST 225
TSST
Sbjct: 2545 TSST 2548
Score = 25.0 bits (52), Expect = 5.0
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ VV + +T+ + S SVL+ + +
Sbjct: 2785 TSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPI 2844
Query: 214 TSST 225
TSST
Sbjct: 2845 TSST 2848
Score = 25.0 bits (52), Expect = 5.0
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 82 TLQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSLTSST 225
TL ST ++ V+ + ++T+ + S SVL+ + ++TSS+
Sbjct: 3305 TLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSSS 3352
Score = 24.6 bits (51), Expect = 6.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ VV + +T+ + S SVL+ + +
Sbjct: 469 TSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 528
Query: 214 TSST 225
TSST
Sbjct: 529 TSST 532
Score = 24.6 bits (51), Expect = 6.7
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S ++ T L ST ++ V+ + +T+ + S SVL+ + +
Sbjct: 493 TSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPI 552
Query: 214 TSST 225
TSST
Sbjct: 553 TSST 556
Score = 24.6 bits (51), Expect = 6.7
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ V+ + +T+ + S SVL+ + +
Sbjct: 769 TSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPI 828
Query: 214 TSST 225
TSST
Sbjct: 829 TSST 832
Score = 24.6 bits (51), Expect = 6.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ VV + +T+ + S SVL+ + +
Sbjct: 877 TSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 936
Query: 214 TSST 225
TSST
Sbjct: 937 TSST 940
Score = 24.6 bits (51), Expect = 6.7
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L + L ST ++ V+ + ++T+ + S SVL+ + +
Sbjct: 985 TSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPI 1044
Query: 214 TSST 225
TSST
Sbjct: 1045 TSST 1048
Score = 24.6 bits (51), Expect = 6.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ VV + +T+ + S SVL+ + +
Sbjct: 1033 TSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 1092
Query: 214 TSST 225
TSST
Sbjct: 1093 TSST 1096
Score = 24.6 bits (51), Expect = 6.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ VV + +T+ + S SVL+ + +
Sbjct: 1813 TSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 1872
Query: 214 TSST 225
TSST
Sbjct: 1873 TSST 1876
Score = 24.6 bits (51), Expect = 6.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ VV + +T+ + S SVL+ + +
Sbjct: 2005 TSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 2064
Query: 214 TSST 225
TSST
Sbjct: 2065 TSST 2068
Score = 24.6 bits (51), Expect = 6.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ VV + +T+ + S SVL+ + +
Sbjct: 2581 TSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 2640
Query: 214 TSST 225
TSST
Sbjct: 2641 TSST 2644
Score = 24.6 bits (51), Expect = 6.7
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S ++ T L ST ++ V+ + +T+ + S SVL+ + +
Sbjct: 2605 TSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPI 2664
Query: 214 TSST 225
TSST
Sbjct: 2665 TSST 2668
Score = 24.6 bits (51), Expect = 6.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ VV + +T+ + S SVL+ + +
Sbjct: 2677 TSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 2736
Query: 214 TSST 225
TSST
Sbjct: 2737 TSST 2740
Score = 24.6 bits (51), Expect = 6.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ VV + +T+ + S SVL+ + +
Sbjct: 2905 TSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 2964
Query: 214 TSST 225
TSST
Sbjct: 2965 TSST 2968
Score = 24.6 bits (51), Expect = 6.7
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S ++ T L ST ++ V+ + +T+ + S SVL+ + +
Sbjct: 2929 TSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPI 2988
Query: 214 TSST 225
TSST
Sbjct: 2989 TSST 2992
Score = 24.2 bits (50), Expect = 8.8
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S IL T L ST ++ + +T+ S S SVL+ + +
Sbjct: 421 TSSSILNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPI 480
Query: 214 TSST 225
TSST
Sbjct: 481 TSST 484
Score = 24.2 bits (50), Expect = 8.8
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST + V+ + +T+ + S SVL+ + +
Sbjct: 565 TSSSVLNSSTPITSSTVVNTSTPITRYSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPI 624
Query: 214 TSST 225
TSST
Sbjct: 625 TSST 628
Score = 24.2 bits (50), Expect = 8.8
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S ++ T L ST ++ V+ + +T+ + S SVL+ + +
Sbjct: 1057 TSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPI 1116
Query: 214 TSST 225
TSST
Sbjct: 1117 TSST 1120
Score = 24.2 bits (50), Expect = 8.8
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGTL-QLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S +L T+ ST ++ VV + +T+ + S SVL+ + +
Sbjct: 1405 TSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSSTPI 1464
Query: 214 TSST 225
TSST
Sbjct: 1465 TSST 1468
Score = 24.2 bits (50), Expect = 8.8
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 TMSDILEDDLEFRGGT-LQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADSL 213
T S ++ T L ST ++ V+ + +T+ + S SVL+ + +
Sbjct: 1573 TSSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPI 1632
Query: 214 TSST 225
TSST
Sbjct: 1633 TSST 1636
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 91 VEAYRPETRDHLLKYRSLYPNIYTK 17
VE+Y + H +Y SL+PN +TK
Sbjct: 55 VESYISKLDQHFTEYPSLFPNEHTK 79
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 91 VEAYRPETRDHLLKYRSLYPNIYTK 17
VE+Y + H +Y SL+PN +TK
Sbjct: 55 VESYISKLDQHFTEYPSLFPNEHTK 79
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 91 VEAYRPETRDHLLKYRSLYPNIYTK 17
VE+Y + H +Y SL+PN +TK
Sbjct: 55 VESYISKLDQHFTEYPSLFPNEHTK 79
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 91 VEAYRPETRDHLLKYRSLYPNIYTK 17
VE+Y + H +Y SL+PN +TK
Sbjct: 55 VESYISKLDQHFTEYPSLFPNEHTK 79
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 91 VEAYRPETRDHLLKYRSLYPNIYTK 17
VE+Y + H +Y SL+PN +TK
Sbjct: 55 VESYISKLDQHFTEYPSLFPNEHTK 79
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 91 VEAYRPETRDHLLKYRSLYPNIYTK 17
VE+Y + H +Y SL+PN +TK
Sbjct: 55 VESYISKLDQHFTEYPSLFPNEHTK 79
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -2
Query: 312 HTEGIPSETLL--EIILRHSAVLCSSICKRISR*CQRICTGENR-RMHIALGLF 160
H IP +L + +LRH +SI +SR C + +G+N + +AL F
Sbjct: 2645 HLSSIPKAKILIGKELLRHGQEYGNSITNDLSRLCADVKSGKNESELQVALAPF 2698
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 91 VEAYRPETRDHLLKYRSLYPNIYTK 17
VE+Y + H +Y SL+PN +TK
Sbjct: 55 VESYISKLDQHFTEYPSLFPNEHTK 79
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 91 VEAYRPETRDHLLKYRSLYPNIYTK 17
VE+Y + H +Y SL+PN +TK
Sbjct: 55 VESYISKLDQHFTEYPSLFPNEHTK 79
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 91 VEAYRPETRDHLLKYRSLYPNIYTK 17
VE+Y + H +Y SL+PN +TK
Sbjct: 55 VESYISKLDQHFTEYPSLFPNEHTK 79
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 91 VEAYRPETRDHLLKYRSLYPNIYTK 17
VE+Y + H +Y SL+PN +TK
Sbjct: 55 VESYISKLDQHFTEYPSLFPNEHTK 79
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 27.1 bits (57), Expect = 1.2
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 76 GGTLQLSTDNSAVGVVENQPSVTTDSTRKQSQGNVHPSVLSGADS 210
GGTL +ST+N V + Q + + +++Q V P +L DS
Sbjct: 582 GGTLYVSTNNGYVLMFNFQNGQVIEHSLRRNQLGVAPIILKHFDS 626
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 91 VEAYRPETRDHLLKYRSLYPNIYTK 17
VE+Y + H +Y SL+PN +TK
Sbjct: 55 VESYISKLDQHFTEYPSLFPNEHTK 79
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 25.8 bits (54), Expect = 2.9
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -1
Query: 166 TVFL*NLS*HWADFQQHLPQNCRLKVEAYRPETRDHLLKYRSLYPNIYTKA 14
+ F ++S HW D + +C+ ++EA+ + +L + N+ KA
Sbjct: 335 STFTLSVSEHWEDLLRKATDSCQKELEAFEEISNLRVLAVENSLGNLIQKA 385
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.4 bits (53), Expect = 3.8
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 127 NQPSVTTDSTRKQSQGNVH-PSVLSGADSLTSSTN 228
N PSV+T K + N H P V + ++S ++S+N
Sbjct: 1191 NPPSVSTVQQSKPIESNTHTPEVKATSESPSASSN 1225
>SPAC3A11.07 |||NADH dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 3.8
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 28 YLGTMSDILEDDLEFRGGTLQLSTDNSAVGVVENQPSV 141
+ G M+D +EDDL+ L D+ AV +VE PSV
Sbjct: 269 FAGEMADFIEDDLKSWYPEL---ADDFAVTLVEALPSV 303
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 25.4 bits (53), Expect = 3.8
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 261 NASGLSPTESQTVYPRYDVPFN--KENIKD 344
NAS ++P + ++ VPFN ENI D
Sbjct: 339 NASNIAPDSAPPASSQFSVPFNAAAENIND 368
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 25.0 bits (52), Expect = 5.0
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -3
Query: 299 YRLRLCWR*S*GI--LLSCVLASAKELVDDVKESAPERTEGCTLPW 168
+ LR+ WR S G+ ++ CVL + + D K + +PW
Sbjct: 246 HHLRIVWRLSIGLGLVIPCVLLPFRIAMKDPKTYVKHKVPLTKIPW 291
>SPBC1A4.10c |pmc1|SPBP23A10.01c, med14|mediator complex subunit
Pmc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 879
Score = 25.0 bits (52), Expect = 5.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 359 SECEEVFYILLIEWH 315
S CE ++LL+EWH
Sbjct: 349 SSCEYDHFLLLVEWH 363
>SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 530
Score = 24.6 bits (51), Expect = 6.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 300 IPSETLLEIILRHSAVLCSSICKRI 226
+P T EI HSAVL S+C +I
Sbjct: 83 LPGATSSEIQSEHSAVLRGSLCIQI 107
>SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 732
Score = 24.6 bits (51), Expect = 6.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 127 NQPSVTTDSTRKQSQGNVHPSVLSGADSLTSSTNS 231
N PS S + G PS+LSG +S NS
Sbjct: 22 NFPSAPVSSLDTNNYGQRRPSLLSGTSPTSSFFNS 56
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 24.2 bits (50), Expect = 8.8
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -3
Query: 371 YNTFSECEEVFYILLIEWHIIP 306
Y TF+ +E+F +L+I +H +P
Sbjct: 624 YKTFTTPQELFTLLVILFHELP 645
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 24.2 bits (50), Expect = 8.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 187 SVLSGADSLTSSTNSFADARTQDSRMPQDYLQQSLRRYT 303
+++ GA+ + ++ NSF DAR D + + S RR T
Sbjct: 484 TLMLGAEGIKNAINSFDDARKLDIQNERLPPSNSRRRST 522
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,918,089
Number of Sequences: 5004
Number of extensions: 39245
Number of successful extensions: 213
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 156095170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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