Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0674
         (436 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019034-1|AAH19034.1|  213|Homo sapiens FAM79A protein protein.       34   0.18 
AL513320-6|CAI14338.1|  213|Homo sapiens family with sequence si...    34   0.18 
AL513320-5|CAI14339.1|  272|Homo sapiens family with sequence si...    34   0.18 
BC036504-1|AAH36504.3|  680|Homo sapiens chromosome 9 open readi...    29   6.9  
AL158826-17|CAI12843.1|  680|Homo sapiens chromosome 9 open read...    29   6.9  
AK131545-1|BAD18679.1|  213|Homo sapiens protein ( Homo sapiens ...    29   6.9  
AK131533-1|BAD18670.1|  213|Homo sapiens protein ( Homo sapiens ...    29   6.9  

>BC019034-1|AAH19034.1|  213|Homo sapiens FAM79A protein protein.
          Length = 213

 Score = 34.3 bits (75), Expect = 0.18
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +3

Query: 291 QTVYP-RYDVPFNKENIKDFFTFRKGVVEAXIQECITILLFPEDGEYLG 434
           QT++P     P  +  +K++F FR G +E  ++E   ++   EDGE  G
Sbjct: 44  QTLWPLSIHDPTRRARVKEYFVFRPGSIEQAVEEIRVVVRPVEDGEIQG 92


>AL513320-6|CAI14338.1|  213|Homo sapiens family with sequence
           similarity 79, member A protein.
          Length = 213

 Score = 34.3 bits (75), Expect = 0.18
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +3

Query: 291 QTVYP-RYDVPFNKENIKDFFTFRKGVVEAXIQECITILLFPEDGEYLG 434
           QT++P     P  +  +K++F FR G +E  ++E   ++   EDGE  G
Sbjct: 44  QTLWPLSIHDPTRRARVKEYFVFRPGSIEQAVEEIRVVVRPVEDGEIQG 92


>AL513320-5|CAI14339.1|  272|Homo sapiens family with sequence
           similarity 79, member A protein.
          Length = 272

 Score = 34.3 bits (75), Expect = 0.18
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +3

Query: 291 QTVYP-RYDVPFNKENIKDFFTFRKGVVEAXIQECITILLFPEDGEYLG 434
           QT++P     P  +  +K++F FR G +E  ++E   ++   EDGE  G
Sbjct: 44  QTLWPLSIHDPTRRARVKEYFVFRPGSIEQAVEEIRVVVRPVEDGEIQG 92


>BC036504-1|AAH36504.3|  680|Homo sapiens chromosome 9 open reading
           frame 96 protein.
          Length = 680

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 177 IALGLFSCRICRDTGLIFNNTYR 109
           +AL L S R+C+D  L+ NN YR
Sbjct: 546 VALLLQSIRLCQDRALLVNNAYR 568


>AL158826-17|CAI12843.1|  680|Homo sapiens chromosome 9 open reading
           frame 96 protein.
          Length = 680

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 177 IALGLFSCRICRDTGLIFNNTYR 109
           +AL L S R+C+D  L+ NN YR
Sbjct: 546 VALLLQSIRLCQDRALLVNNAYR 568


>AK131545-1|BAD18679.1|  213|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16781 fis, clone BRTHA3004432. ).
          Length = 213

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 177 IALGLFSCRICRDTGLIFNNTYR 109
           +AL L S R+C+D  L+ NN YR
Sbjct: 79  VALLLQSIRLCQDRALLVNNAYR 101


>AK131533-1|BAD18670.1|  213|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16762 fis, clone BRAMY3016953. ).
          Length = 213

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 177 IALGLFSCRICRDTGLIFNNTYR 109
           +AL L S R+C+D  L+ NN YR
Sbjct: 79  VALLLQSIRLCQDRALLVNNAYR 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,186,998
Number of Sequences: 237096
Number of extensions: 1405872
Number of successful extensions: 3112
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3112
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)