Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0673
         (421 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   2.8  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   3.7  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   3.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   8.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   8.5  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    20   8.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    20   8.5  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    20   8.5  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    20   8.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 167 GSLFHSSRWLMTLMNSC 217
           G ++ ++ W+ TLMN C
Sbjct: 728 GLVYIATVWICTLMNRC 744


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
          recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 19 AQTAAPGGDTIFGKILRKE 75
          A  A PGG T+  K LRK+
Sbjct: 13 ASEAFPGGRTLVEKGLRKQ 31


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 333 EGGKRFGRHSFHR*QLGGSLSC 268
           EG   +GRH F +  + GS +C
Sbjct: 34  EGDPCYGRHFFKKNLIVGSENC 55


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 11/49 (22%), Positives = 21/49 (42%)
 Frame = -2

Query: 207 ISVISQRELWNRLPWYHQYMSRSLWVHIIERYALFVFVNEICRDFFT*Y 61
           +  +S R     + W+  ++  +L    I  Y  FV+   +  +FF  Y
Sbjct: 382 LKTVSNRNDKGDIFWFSPFLVANLAFVTIVTYETFVWTQIMGAEFFKLY 430


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 221 DIF*LLPVKLLPARPGQDRLPP 286
           D +   P  L+P  PG    PP
Sbjct: 220 DFYRFSPTGLIPPHPGLSPHPP 241


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 221 DIF*LLPVKLLPARPGQDRLPP 286
           D +   P  L+P  PG    PP
Sbjct: 112 DFYRFSPTGLIPPHPGLSPHPP 133


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 250 QLYGQQLEDVLTTVHQCHQPA 188
           Q Y Q    V+  ++ C QPA
Sbjct: 100 QFYHQAASAVVDPLNSCSQPA 120


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 250 QLYGQQLEDVLTTVHQCHQPA 188
           Q Y Q    V+  ++ C QPA
Sbjct: 159 QFYHQAASAVVDPLNSCSQPA 179


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 250 QLYGQQLEDVLTTVHQCHQPA 188
           Q Y Q    V+  ++ C QPA
Sbjct: 100 QFYHQAASAVVDPLNSCSQPA 120


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 250 QLYGQQLEDVLTTVHQCHQPA 188
           Q Y Q    V+  ++ C QPA
Sbjct: 159 QFYHQAASAVVDPLNSCSQPA 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,784
Number of Sequences: 336
Number of extensions: 2246
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)