Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0673
(421 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71261-3|CAA95802.1| 130|Caenorhabditis elegans Hypothetical pr... 90 7e-19
AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical... 38 0.002
AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and... 38 0.002
U53148-1|AAB37071.1| 175|Caenorhabditis elegans Hypothetical pr... 31 0.25
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 30 0.58
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 27 5.5
Z73098-1|CAA97330.2| 269|Caenorhabditis elegans Hypothetical pr... 26 9.5
L14324-7|AAA28181.2| 565|Caenorhabditis elegans Prolyl carboxy ... 26 9.5
>Z71261-3|CAA95802.1| 130|Caenorhabditis elegans Hypothetical
protein F21C3.3 protein.
Length = 130
Score = 89.8 bits (213), Expect = 7e-19
Identities = 40/70 (57%), Positives = 54/70 (77%)
Frame = +1
Query: 43 DTIFGKILRKEIPANFIYEDEQCVAFNDVNPQAPTHVLVIPRKPIPQLSLADDTDEQLLG 222
DT+FGKI+RKEIPA I+ED++ +AF+DV+PQAP H LVIP++ I L A D+D L+G
Sbjct: 20 DTLFGKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDMLENAVDSDAALIG 79
Query: 223 HLLIVARKVA 252
L++ A KVA
Sbjct: 80 KLMVTASKVA 89
Score = 72.5 bits (170), Expect = 1e-13
Identities = 29/41 (70%), Positives = 38/41 (92%)
Frame = +3
Query: 255 QLGLDKTGFRLVVNDGKNGAQSVYHLHIHILGGRQMQWPPG 377
QLG+ G+R+VVN+GK+GAQSV+HLH+H+LGGRQ+QWPPG
Sbjct: 91 QLGM-ANGYRVVVNNGKDGAQSVFHLHLHVLGGRQLQWPPG 130
>AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical
protein Y56A3A.13 protein.
Length = 440
Score = 38.3 bits (85), Expect = 0.002
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 58 KILRKEIPANFI-YEDEQCVAFNDVNPQAPTHVLVIPRKPIPQLSLADDTDEQLLGHLLI 234
K R IPA+ I Y F ++ P HVLV P++ +P+L+ D TD + L I
Sbjct: 300 KFARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLT--DLTDAE-TADLFI 356
Query: 235 VARKVAA 255
VA+KV A
Sbjct: 357 VAKKVQA 363
Score = 32.3 bits (70), Expect = 0.14
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 273 TGFRLVVNDGKNGAQSVYHLHIHILGGR 356
T + V DGK+ Q+V H+HIHIL R
Sbjct: 372 TSTTICVQDGKDAGQTVPHVHIHILPRR 399
>AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and
fragile histidinetriad fusion protein NitFhit protein.
Length = 440
Score = 38.3 bits (85), Expect = 0.002
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 58 KILRKEIPANFI-YEDEQCVAFNDVNPQAPTHVLVIPRKPIPQLSLADDTDEQLLGHLLI 234
K R IPA+ I Y F ++ P HVLV P++ +P+L+ D TD + L I
Sbjct: 300 KFARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLT--DLTDAE-TADLFI 356
Query: 235 VARKVAA 255
VA+KV A
Sbjct: 357 VAKKVQA 363
Score = 32.3 bits (70), Expect = 0.14
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 273 TGFRLVVNDGKNGAQSVYHLHIHILGGR 356
T + V DGK+ Q+V H+HIHIL R
Sbjct: 372 TSTTICVQDGKDAGQTVPHVHIHILPRR 399
>U53148-1|AAB37071.1| 175|Caenorhabditis elegans Hypothetical
protein C26F1.7 protein.
Length = 175
Score = 31.5 bits (68), Expect = 0.25
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +1
Query: 97 EDEQCVAFNDVNPQAPTHVLVIPRKPIPQ---LSLAD 198
E++ CV ND+ P+A H LV+ ++ I + L++AD
Sbjct: 27 ENKSCVVINDIKPKAKNHYLVLSKQHIAKPTDLTVAD 63
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 30.3 bits (65), Expect = 0.58
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +1
Query: 175 IPQLSLADDTDEQLLGHLLIVARKVAAS*AWTRQASA*LLTMERMAPKAFTTFTFI 342
+PQL + +DTDE L LL+ K AA+ + R+A A + + K FTT +I
Sbjct: 1123 LPQLDVDEDTDEYRLRRLLLFGLKPAAN-VYFRRARA----IYKSITKEFTTRLYI 1173
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 274 VLSRPSWQQLYGQQLEDVLTTVHQCH 197
+LSRPS L+ ++L ++LT V H
Sbjct: 317 MLSRPSGDHLFRRELNEILTPVSAVH 342
>Z73098-1|CAA97330.2| 269|Caenorhabditis elegans Hypothetical
protein T21C9.1 protein.
Length = 269
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +1
Query: 91 IYEDEQCVAFNDVNPQAPTHVLVIPRKPIPQLSLADDTDEQLLGHLLIVA 240
+YE+E + P + + +PR P LSL D + L L V+
Sbjct: 199 VYEEEDAQSVTSYAPSTHSIIDDVPRTPRKPLSLLDPRNNSWLTEALYVS 248
>L14324-7|AAA28181.2| 565|Caenorhabditis elegans Prolyl carboxy
peptidase like protein1 protein.
Length = 565
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = -3
Query: 140 ACGFTSLNATHCSSS*MKFAGISLRNIFPKIVSPPGAAVCASFTSC 3
ACG+ + N T S + A + NI+ P C F+ C
Sbjct: 312 ACGYMNANGTSFSDKDLVKAVANAANIYYNYNRDPNFTYCIDFSIC 357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,142,178
Number of Sequences: 27780
Number of extensions: 207103
Number of successful extensions: 529
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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