Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0671
         (398 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   4.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   4.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   5.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   7.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   7.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   7.8  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    20   7.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    20   7.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    20   7.8  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 21  MARGPKKHLKRLNAPKAWMLDKLG 92
           + R P +++K++N   A  LD+ G
Sbjct: 609 IGRSPDQNVKKINLKHALDLDRRG 632


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 21  MARGPKKHLKRLNAPKAWMLDKLG 92
           + R P +++K++N   A  LD+ G
Sbjct: 609 IGRSPDQNVKKINLKHALDLDRQG 632


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 188 SKHTSDDSSGKSQGQA 141
           S+H+ D+ SGKS   A
Sbjct: 165 SEHSVDELSGKSDNDA 180


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +2

Query: 185 LTGNEVLKIVKQRLIK 232
           L  N++LK++++ L+K
Sbjct: 392 LQQNKILKVIRKNLVK 407


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 127 WGPVDGLG 104
           WGP +GLG
Sbjct: 339 WGPQEGLG 346


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = -3

Query: 90   QVCPTSMLWER 58
            QVCP  + W +
Sbjct: 2263 QVCPNGLFWNK 2273


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 140 VLAPVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKV 247
           ++ P+I    +    L G+E+  I K+  I  + KV
Sbjct: 126 IVKPIIAFYYKPIKTLNGHEIKFIRKEEYISFESKV 161


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -3

Query: 189 VKAYFRRFLRKITGASTRATCGDRLTVSVHTHR 91
           VK YF   L  ++    R +  + +T  + TH+
Sbjct: 127 VKIYFNHKLMSVSFEDERISVMNLITEEITTHQ 159


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -3

Query: 189 VKAYFRRFLRKITGASTRATCGDRLTVSVHTHR 91
           VK YF   L  ++    R +  + +T  + TH+
Sbjct: 127 VKIYFNHKLMSVSFEDERISVMNLITEEITTHQ 159


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -3

Query: 189 VKAYFRRFLRKITGASTRATCGDRLTVSVHTHR 91
           VK YF   L  ++    R +  + +T  + TH+
Sbjct: 127 VKIYFNHKLMSVSFEDERISVMNLITEEITTHQ 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,903
Number of Sequences: 336
Number of extensions: 2009
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)