Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0671
(398 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 93 1e-19
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 93 1e-19
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 93 1e-19
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 93 1e-19
U29153-1|AAA83086.1| 2616|Drosophila melanogaster serine proteas... 30 1.3
AE014296-1129|AAF50656.1| 2616|Drosophila melanogaster CG10129-P... 29 3.0
U22825-1|AAC46587.2| 170|Drosophila melanogaster amnesiac neuro... 27 9.2
AY060712-1|AAL28260.1| 280|Drosophila melanogaster GH15448p pro... 27 9.2
AF435962-1|AAL31972.1| 280|Drosophila melanogaster mitochondria... 27 9.2
AE013599-3422|AAF46869.1| 280|Drosophila melanogaster CG4207-PA... 27 9.2
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 93.1 bits (221), Expect = 1e-19
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 152
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPL 44
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +1
Query: 256 PTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 396
PTYPAG+MDV+++ KT E FRL+YDVKGRF IHRI+ EEAKYKLCKV
Sbjct: 80 PTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKV 126
Score = 54.4 bits (125), Expect = 5e-08
Identities = 29/44 (65%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = +2
Query: 125 PQVARVLAPVI-FLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 253
P R P++ FLRNRLKYAL G EV KIV QRL+KV GKVRT
Sbjct: 35 PHKLRESLPLLTFLRNRLKYALNGAEVTKIVMQRLVKVYGKVRT 78
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 93.1 bits (221), Expect = 1e-19
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 152
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPL 44
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +1
Query: 256 PTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 396
PTYPAG+MDV+++ KT E FRL+YDVKGRF IHRI+ EEAKYKLCKV
Sbjct: 80 PTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKV 126
Score = 58.8 bits (136), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 152 VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 253
+IFLRNRLKYAL G EV KIV QRL+KVDGKVRT
Sbjct: 45 LIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRT 78
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 93.1 bits (221), Expect = 1e-19
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 152
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPL 44
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +1
Query: 256 PTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 396
PTYPAG+MDV+++ KT E FRL+YDVKGRF IHRI+ EEAKYKLCKV
Sbjct: 80 PTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKV 126
Score = 58.8 bits (136), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 152 VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 253
+IFLRNRLKYAL G EV KIV QRL+KVDGKVRT
Sbjct: 45 LIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRT 78
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 93.1 bits (221), Expect = 1e-19
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 21 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 152
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPL 44
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +1
Query: 256 PTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 396
PTYPAG+MDV+++ KT E FRL+YDVKGRF IHRI+ EEAKYKLCKV
Sbjct: 80 PTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKV 126
Score = 58.8 bits (136), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 152 VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 253
+IFLRNRLKYAL G EV KIV QRL+KVDGKVRT
Sbjct: 45 LIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRT 78
>U29153-1|AAA83086.1| 2616|Drosophila melanogaster serine protease
protein.
Length = 2616
Score = 29.9 bits (64), Expect = 1.3
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Frame = -1
Query: 257 GQS*LSHQPL*GVVSQFSGLRFRSKHTSDDSSGKSQGQAL-AQLVG-----TG*RSRCIH 96
GQS S Q G S FS F+ +H + S+ QGQ + A G RSRC
Sbjct: 834 GQSQTSSQQQQGGQSAFSNANFKMRHANQTSTANQQGQIIYASYAGLPQQPIQERSRCPE 893
Query: 95 TAKFVQHPCFG 63
+F CFG
Sbjct: 894 PDQF---SCFG 901
>AE014296-1129|AAF50656.1| 2616|Drosophila melanogaster CG10129-PA
protein.
Length = 2616
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Frame = -1
Query: 257 GQS*LSHQPL*GVVSQFSGLRFRSKHTSDDSSGKSQGQAL-AQLVG-----TG*RSRCIH 96
GQS S Q G S FS F+ +H + ++ QGQ + A G RSRC
Sbjct: 834 GQSQTSSQQQQGGQSAFSNANFKMRHANQTNTANQQGQIIYASYAGLPQQPIQERSRCPE 893
Query: 95 TAKFVQHPCFG 63
+F CFG
Sbjct: 894 PDQF---SCFG 901
>U22825-1|AAC46587.2| 170|Drosophila melanogaster amnesiac
neuropeptide precursor protein.
Length = 170
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 219 CFTIFRTSFPVKAYFRRFLRKITGASTRATCG--DRLTVSVHTHRQVCPTSML 67
CFT+F F A RR + G++ A C ++L+ S + C T+ L
Sbjct: 10 CFTLFFLLFRASALRRRVVSGSKGSAALALCRQFEQLSASRRERAEECRTTQL 62
>AY060712-1|AAL28260.1| 280|Drosophila melanogaster GH15448p
protein.
Length = 280
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 39 KHLKRLNAPK-AWMLDKLGGVYAPRPS 116
K+L+R + P+ W+L+KL VY P P+
Sbjct: 153 KYLRRWDYPRFEWILEKLDLVYKPPPT 179
>AF435962-1|AAL31972.1| 280|Drosophila melanogaster mitochondrial
ribosomal proteinS15 protein.
Length = 280
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 39 KHLKRLNAPK-AWMLDKLGGVYAPRPS 116
K+L+R + P+ W+L+KL VY P P+
Sbjct: 153 KYLRRWDYPRFEWILEKLDLVYKPPPT 179
>AE013599-3422|AAF46869.1| 280|Drosophila melanogaster CG4207-PA
protein.
Length = 280
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 39 KHLKRLNAPK-AWMLDKLGGVYAPRPS 116
K+L+R + P+ W+L+KL VY P P+
Sbjct: 153 KYLRRWDYPRFEWILEKLDLVYKPPPT 179
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,757,099
Number of Sequences: 53049
Number of extensions: 387348
Number of successful extensions: 1067
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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