Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0666
         (423 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    39   9e-05
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   4.6  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   6.0  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    22   8.0  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    22   8.0  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 38.7 bits (86), Expect = 9e-05
 Identities = 19/60 (31%), Positives = 36/60 (60%)
 Frame = +2

Query: 83  MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDGTE 262
           MA+ L + +I + +  FS++D +G G +   +LG  +R+L  NPT     ++I ++ GT+
Sbjct: 1   MANDLKDVEIEKAQFVFSVYDWEGSGQMDAMDLGNALRALNLNPT----IELIGKMGGTQ 56



 Score = 35.1 bits (77), Expect = 0.001
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +1

Query: 247 SRRDGNGTIDFPEFLTMMA--RKMKDTDSEEEIREAFRVFDKDGNXFISAAELRHVMTNL 420
           +++ G   I F EFL + +  +K K+    E+  E  +++DK+ +  +  AEL H +T L
Sbjct: 55  TQKRGEKKIKFEEFLPIFSQVKKEKEQGCFEDFLECLKLYDKNEDGTMLLAELTHSLTAL 114

Query: 421 G 423
           G
Sbjct: 115 G 115



 Score = 33.1 bits (72), Expect = 0.004
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +2

Query: 116 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 247
           +F E   L+DK+ DGT+   EL   + +LG+   + EL +++ +
Sbjct: 86  DFLECLKLYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMKD 129


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 108 RSPSLRRHSHCSTKTAMAPSRPKS 179
           RSP  RR S  +  T+   SRP S
Sbjct: 272 RSPPARRRSRSTRPTSWPRSRPTS 295


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 13/55 (23%), Positives = 22/55 (40%)
 Frame = +1

Query: 259 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNXFISAAELRHVMTNLG 423
           GN     P+++      +KD D   E  E     DKD +      ++ H +  +G
Sbjct: 681 GNNWKVHPDWVYCEYNSLKDADGNGEGTEESTYRDKDESFDTPEEQVLHFLARVG 735


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 62  DNPS*STMADQLTEEQIAEFKE 127
           D P   T +D++TE+++A F+E
Sbjct: 193 DIPLNYTASDRVTEQRLAYFRE 214


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +1

Query: 253 RDGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 375
           RD    ++ P FL +   +  D     ++RE   + D+ GN
Sbjct: 136 RDDTRDVEIPSFLELFPDRFVDPAVFPQLREESNLLDR-GN 175


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,961
Number of Sequences: 2352
Number of extensions: 6284
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)