Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0666
(423 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 1.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 1.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 1.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 1.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 2.5
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 3.3
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 3.3
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 3.3
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 3.3
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 3.3
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 3.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 4.3
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 21 5.7
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 1.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 331 PRYPCPSSCAPSLSRTRESLSCRFRPVY 248
P P P P+ R R L+ RF P Y
Sbjct: 368 PPTPFPRFIPPNAYRFRPPLNPRFGPTY 395
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 1.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 331 PRYPCPSSCAPSLSRTRESLSCRFRPVY 248
P P P P+ R R L+ RF P Y
Sbjct: 379 PPTPFPRFIPPNAYRFRPPLNPRFGPTY 406
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 1.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 331 PRYPCPSSCAPSLSRTRESLSCRFRPVY 248
P P P P+ R R L+ RF P Y
Sbjct: 379 PPTPFPRFIPPNAYRFRPPLNPRFGPTY 406
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 1.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 331 PRYPCPSSCAPSLSRTRESLSCRFRPVY 248
P P P P+ R R L+ RF P Y
Sbjct: 368 PPTPFPRFIPPNAYRFRPPLNPRFGPTY 395
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 2.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 331 PRYPCPSSCAPSLSRTRESLSCRFRPVY 248
P P P P++ R R L+ RF P +
Sbjct: 372 PPTPFPRFIPPNVYRFRPPLNPRFEPTH 399
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.8 bits (44), Expect = 3.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 420 EVGHDVAQLGRGDEAVAVLVE 358
E+ HDVA G+G E V++ V+
Sbjct: 174 EIPHDVATTGKG-ELVSLTVQ 193
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 3.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 331 PRYPCPSSCAPSLSRTRESLSCRFRPVY 248
P P P P+ R R L+ RF P +
Sbjct: 149 PSTPFPRFIPPNAYRFRPPLNPRFEPTH 176
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 331 PRYPCPSSCAPSLSRTRESLSCRFRPVY 248
P P P P+ R R L+ RF P +
Sbjct: 152 PSTPFPRFIPPNAYRFRPPLNPRFEPTH 179
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 331 PRYPCPSSCAPSLSRTRESLSCRFRPVY 248
P P P P+ R R L+ RF P +
Sbjct: 152 PSTPFPRFIPPNAYRFRPPLNPRFEPTH 179
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 331 PRYPCPSSCAPSLSRTRESLSCRFRPVY 248
P P P P+ R R L+ RF P +
Sbjct: 152 PSTPFPRFIPPNAYRFRPPLNPRFEPTH 179
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 331 PRYPCPSSCAPSLSRTRESLSCRFRPVY 248
P P P P+ R R L+ RF P +
Sbjct: 152 PSTPFPRFIPPNAYRFRPPLNPRFEPTH 179
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 4.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 337 FLPRYPCPSSCAP 299
F P Y P++CAP
Sbjct: 1803 FSPEYDDPANCAP 1815
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 21.0 bits (42), Expect = 5.7
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 138 CSTKTAMAPSRPKSWA 185
C+T T AP RP A
Sbjct: 8 CTTATLAAPQRPSGGA 23
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,867
Number of Sequences: 438
Number of extensions: 1478
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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