Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0665
         (432 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9XW78 Cluster: Putative uncharacterized protein; n=2; ...    63   2e-09
UniRef50_A7SPR0 Cluster: Predicted protein; n=1; Nematostella ve...    63   3e-09
UniRef50_Q8WUF8 Cluster: Uncharacterized protein C5orf21; n=37; ...    62   4e-09
UniRef50_Q1HR15 Cluster: Conserved protein; n=4; Culicidae|Rep: ...    62   5e-09
UniRef50_UPI0000E4786C Cluster: PREDICTED: similar to 1110033M05...    56   2e-07
UniRef50_Q95RN0 Cluster: LD19518p; n=4; Sophophora|Rep: LD19518p...    48   1e-04
UniRef50_Q557B6 Cluster: Putative uncharacterized protein; n=2; ...    41   0.010
UniRef50_Q8I2J6 Cluster: Putative uncharacterized protein PFI155...    36   0.36 
UniRef50_Q22C95 Cluster: Zinc carboxypeptidase family protein; n...    34   1.1  
UniRef50_Q5KHR3 Cluster: Autophagy-related protein 9; n=3; Treme...    33   1.9  
UniRef50_UPI0000E87D46 Cluster: hypothetical protein MB2181_0187...    33   2.6  
UniRef50_A7P845 Cluster: Chromosome chr3 scaffold_8, whole genom...    32   4.5  
UniRef50_A7H720 Cluster: Putative uncharacterized protein; n=1; ...    31   7.8  
UniRef50_Q4Q8C2 Cluster: Putative uncharacterized protein; n=3; ...    31   7.8  

>UniRef50_Q9XW78 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 313

 Score = 63.3 bits (147), Expect = 2e-09
 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 5/64 (7%)
 Frame = +3

Query: 255 AITNYVYDILQTQIGLQ----KLPIPKDSN-DGTFIFVSKDYDKKDVLLILIHGSGVVRA 419
           A+   VY++L+T+ GL+    KLP   D + D +FIFVSK++ K   LL+LIHGSGVVRA
Sbjct: 40  AVDLEVYELLETRCGLKRKALKLPGKTDEDEDLSFIFVSKNFKKAANLLVLIHGSGVVRA 99

Query: 420 GQWA 431
           GQWA
Sbjct: 100 GQWA 103


>UniRef50_A7SPR0 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 310

 Score = 62.9 bits (146), Expect = 3e-09
 Identities = 30/61 (49%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
 Frame = +3

Query: 258 ITNYVYDILQTQIGLQKLPIPKDSNDGT---FIFVSKDYDKKDVLLILIHGSGVVRAGQW 428
           IT++VY +L+ + GL+++ +P D  +     FIF+S+D  + + L+ILIHGSGVVRAGQW
Sbjct: 47  ITDHVYKLLEEKAGLKRVYVPIDPRENESVGFIFMSEDALRAEKLMILIHGSGVVRAGQW 106

Query: 429 A 431
           A
Sbjct: 107 A 107



 Score = 39.1 bits (87), Expect = 0.039
 Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 109 TMKELGYIFDSNGQVRKIGADGQPTDEPFQFVVS-NDHQECQAHYEELG 252
           T++E GY F+  GQ+R I      T EPF F V   D Q  Q HYE LG
Sbjct: 1   TIEEFGYHFNERGQLRSI-----QTGEPFMFEVKPGDRQYNQNHYEALG 44


>UniRef50_Q8WUF8 Cluster: Uncharacterized protein C5orf21; n=37;
           Euteleostomi|Rep: Uncharacterized protein C5orf21 - Homo
           sapiens (Human)
          Length = 416

 Score = 62.5 bits (145), Expect = 4e-09
 Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
 Frame = +3

Query: 258 ITNYVYDILQTQIGLQKLPIPKDSNDG---TFIFVSKD-YDKKDVLLILIHGSGVVRAGQ 425
           IT YVY++L+    L+K+ IP D+ +    +FIF+S+D       L++LIHGSGVVRAGQ
Sbjct: 105 ITKYVYELLEKDCNLKKVSIPVDATESEPKSFIFMSEDALTNPQKLMVLIHGSGVVRAGQ 164

Query: 426 WA 431
           WA
Sbjct: 165 WA 166


>UniRef50_Q1HR15 Cluster: Conserved protein; n=4; Culicidae|Rep:
           Conserved protein - Aedes aegypti (Yellowfever mosquito)
          Length = 345

 Score = 62.1 bits (144), Expect = 5e-09
 Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
 Frame = +3

Query: 258 ITNYVYDILQTQIGLQKLPIPKD--SNDGTFIFVSKD-YDKKDVLLILIHGSGVVRAGQW 428
           IT+ VY+ L+  +G++KL +P D    + TFIF + D  +K   LL+LIHGSGVVRAGQW
Sbjct: 90  ITDTVYERLEKDVGMKKLFLPDDVPQEEATFIFSTTDKLNKPKKLLVLIHGSGVVRAGQW 149

Query: 429 A 431
           A
Sbjct: 150 A 150



 Score = 42.7 bits (96), Expect = 0.003
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
 Frame = +1

Query: 109 TMKELGYIFDSNGQVRKIGAD-GQPTDEPFQFVVSNDHQECQAHYEELGSQSPIMFMIFF 285
           T++  GY F+ +G++++I  + G+ TD+ F F +    QE QAHYE LG    I   ++ 
Sbjct: 39  TLEGFGYGFNEDGKLKQIDKETGKLTDKGFDFNIYTSAQENQAHYEALG--ETITDTVYE 96

Query: 286 RLRLDC---KSYQSQRIQMMEHLFLF 354
           RL  D    K +    +   E  F+F
Sbjct: 97  RLEKDVGMKKLFLPDDVPQEEATFIF 122


>UniRef50_UPI0000E4786C Cluster: PREDICTED: similar to 1110033M05Rik
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to 1110033M05Rik protein -
           Strongylocentrotus purpuratus
          Length = 454

 Score = 56.4 bits (130), Expect = 2e-07
 Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
 Frame = +3

Query: 258 ITNYVYDILQTQIGLQKLPIPKDSNDG---TFIFVSKD-YDKKDVLLILIHGSGVVRAGQ 425
           +T ++Y +L+T+  LQ++ IP D  +    +F+F SK+    +D LL+LI+G+G VRAGQ
Sbjct: 125 LTQHIYKLLETETKLQRIDIPTDLQEDEPRSFVFASKNALVTRDKLLVLINGAGAVRAGQ 184

Query: 426 WA 431
           WA
Sbjct: 185 WA 186


>UniRef50_Q95RN0 Cluster: LD19518p; n=4; Sophophora|Rep: LD19518p -
           Drosophila melanogaster (Fruit fly)
          Length = 325

 Score = 47.6 bits (108), Expect = 1e-04
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = +1

Query: 112 MKELGYIFDSNGQVRKIG-ADGQPTDEPFQFVVSNDHQECQAHYEELGSQSP 264
           +K  GY FD  G +RK+  A G+P  E F + VS+D  E + HY++L +Q P
Sbjct: 34  LKNFGYAFDGEGVLRKVDPATGEPGKELFSYNVSDDAAENEKHYQKLANQIP 85



 Score = 40.3 bits (90), Expect = 0.017
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = +3

Query: 258 ITNYVYDILQTQIGLQKLPIPKDS--NDGTFIFVSK-DYDKKDVLLILIHGSGVVRAGQW 428
           I   VY +L+   GL +  IP D      +F+F       +   LL+LIHGSG V+AGQW
Sbjct: 84  IPEIVYALLEKN-GLSRTYIPFDQPPERSSFVFSQPAKLSQSKKLLVLIHGSGYVKAGQW 142

Query: 429 A 431
           A
Sbjct: 143 A 143


>UniRef50_Q557B6 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 385

 Score = 41.1 bits (92), Expect = 0.010
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +3

Query: 294 IGLQKLPIPKDSNDGTFIFVSKDY-DKKDVLLILIHGSGVVRAGQWA 431
           I L++  IPK   +   IF SKD+ +    L++ I+GSG V++GQWA
Sbjct: 127 INLEEHWIPKGETNQCNIFTSKDFFENPTKLMVFINGSGAVKSGQWA 173


>UniRef50_Q8I2J6 Cluster: Putative uncharacterized protein PFI1555w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFI1555w - Plasmodium falciparum
           (isolate 3D7)
          Length = 185

 Score = 35.9 bits (79), Expect = 0.36
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -1

Query: 246 FFIMSLAFLVIIAHNKLEWFICWLSISS-NFSYLTI*IKYVSQFLHSFRSLHFVMHFIST 70
           F+ +S  F +   H    W  CW+  S   F+YL+    ++  FL      +F++ F ST
Sbjct: 95  FYFLSSIFYLFFLHRFRSW-CCWIFASYFKFNYLSFFCSFLDIFLCKHIICYFIIFFNST 153

Query: 69  RCNRL 55
            C +L
Sbjct: 154 ECIKL 158


>UniRef50_Q22C95 Cluster: Zinc carboxypeptidase family protein; n=1;
           Tetrahymena thermophila SB210|Rep: Zinc carboxypeptidase
           family protein - Tetrahymena thermophila SB210
          Length = 1323

 Score = 34.3 bits (75), Expect = 1.1
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -3

Query: 358 FETKINVPSFESFGIGNFCNPI 293
           FE K    SF+S+GIGNF NPI
Sbjct: 42  FENKYESASFQSYGIGNFMNPI 63


>UniRef50_Q5KHR3 Cluster: Autophagy-related protein 9; n=3;
           Tremellomycetes|Rep: Autophagy-related protein 9 -
           Cryptococcus neoformans (Filobasidiella neoformans)
          Length = 879

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +1

Query: 25  ISKVRLRPHRKSIASSANKVHYKMEGTKTMKELGYIFDSNGQVRK 159
           +  ++  P RK ++  AN +   +E       LGY+FD  GQVRK
Sbjct: 322 LPSLQSEPERKFLSFGANHLTKALEWNLRFCLLGYLFDRRGQVRK 366


>UniRef50_UPI0000E87D46 Cluster: hypothetical protein MB2181_01875;
           n=1; Methylophilales bacterium HTCC2181|Rep:
           hypothetical protein MB2181_01875 - Methylophilales
           bacterium HTCC2181
          Length = 407

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -1

Query: 249 KFFIMSLAFLVIIAHNKLEWFICWLSISSNFSYLTI*IKYVSQFLHSFRSL 97
           K FI    +   I +  L   ICW  +S+ FSY T   +Y   F    R+L
Sbjct: 200 KIFIPVKTYSQYIFYGALVTSICWFGLSNTFSYFTSISEYYGVFFGGMRNL 250


>UniRef50_A7P845 Cluster: Chromosome chr3 scaffold_8, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr3 scaffold_8, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 2001

 Score = 32.3 bits (70), Expect = 4.5
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +1

Query: 223 ECQAHYEELGSQSPIMFMIFFRLRLDCKSYQSQRIQMM 336
           EC+  + +L + +  +F++FFRL + C+S   Q I ++
Sbjct: 823 ECKNDFRKLRASTQWIFVLFFRLYMSCRSLYRQSISLV 860


>UniRef50_A7H720 Cluster: Putative uncharacterized protein; n=1;
           Anaeromyxobacter sp. Fw109-5|Rep: Putative
           uncharacterized protein - Anaeromyxobacter sp. Fw109-5
          Length = 471

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 13/25 (52%), Positives = 21/25 (84%)
 Frame = -1

Query: 423 DQLAQRLIRESILTEHLFYHNLLKQ 349
           ++LA+R+ RES+L E LF+H+ LK+
Sbjct: 294 ERLARRVPRESVLREALFHHDALKR 318


>UniRef50_Q4Q8C2 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 725

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +3

Query: 258 ITNYVYDILQTQIGLQKLPIPKDSNDGTFIF--VSKDYDKKDVLLILIHGSGVVRAGQ 425
           +++  YD   T I L K  + KD +DG+F+F  V +   +K+ +L  +    + RA +
Sbjct: 79  LSSLFYDTSVTDITLSKRKLTKDDDDGSFVFGQVPRGSMRKEQILKYVDMDELARASE 136


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,359,384
Number of Sequences: 1657284
Number of extensions: 8042555
Number of successful extensions: 19728
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19714
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)