Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0665
         (432 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   0.94 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   1.2  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   2.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   2.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   6.6  

>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 0.94
 Identities = 14/59 (23%), Positives = 30/59 (50%)
 Frame = -1

Query: 306 FAIQSESEEYHKHNW*LRAKFFIMSLAFLVIIAHNKLEWFICWLSISSNFSYLTI*IKY 130
           +A+++E ++  +H   +  +     L F      N L+W  C + I++  +YL I I++
Sbjct: 315 YALKNEVDKRVRHLQLVAIRLLNTKLQFTAKDFFN-LDWTFCHMMIAALTTYLVILIQF 372


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 193 MVHLLAVHQLQFFLLDHL 140
           ++H  +  QLQFF ++HL
Sbjct: 29  IIHTTSNKQLQFFAVEHL 46


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 280 FFRLRLDCKSYQSQRIQMMEHLFLFQKI 363
           F +L L   + +S  ++ +EHLF F+ I
Sbjct: 361 FAKLLLRLPALRSIGLKCLEHLFFFKLI 388


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = -1

Query: 207 HNKLEWF-ICWLSISSNFSYLTI*IKYVSQFLHSFRSLHF 91
           + K  W  +C L++S    +     K + QF+  F   HF
Sbjct: 52  NRKYYWLNVCCLNLSIVTIFFNFATKKLEQFIVRFMKYHF 91


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 345 IFVSKDYDKKDVLLILIHGSG 407
           +FV   Y    + L+LI GSG
Sbjct: 238 LFVGVIYTTYTIFLLLIFGSG 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,002
Number of Sequences: 336
Number of extensions: 2114
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)