Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0665
         (432 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020584-1|AAH20584.1|  416|Homo sapiens chromosome 5 open readi...    62   6e-10
M83670-1|AAA35630.1|  312|Homo sapiens carbonic anhydrase IV pro...    29   5.1  
L10955-2|AAA35626.1|  222|Homo sapiens carbonic anhydrase IV pro...    29   5.1  
L10955-1|AAA35625.1|  294|Homo sapiens carbonic anhydrase IV pro...    29   5.1  
CR541766-1|CAG46565.1|  312|Homo sapiens CA4 protein.                  29   5.1  
BC074768-1|AAH74768.1|  312|Homo sapiens carbonic anhydrase IV p...    29   5.1  
BC069649-1|AAH69649.1|  312|Homo sapiens carbonic anhydrase IV p...    29   5.1  
BC057792-1|AAH57792.1|  312|Homo sapiens carbonic anhydrase IV p...    29   5.1  

>BC020584-1|AAH20584.1|  416|Homo sapiens chromosome 5 open reading
           frame 21 protein.
          Length = 416

 Score = 62.5 bits (145), Expect = 6e-10
 Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
 Frame = +3

Query: 258 ITNYVYDILQTQIGLQKLPIPKDSNDG---TFIFVSKD-YDKKDVLLILIHGSGVVRAGQ 425
           IT YVY++L+    L+K+ IP D+ +    +FIF+S+D       L++LIHGSGVVRAGQ
Sbjct: 105 ITKYVYELLEKDCNLKKVSIPVDATESEPKSFIFMSEDALTNPQKLMVLIHGSGVVRAGQ 164

Query: 426 WA 431
           WA
Sbjct: 165 WA 166


>M83670-1|AAA35630.1|  312|Homo sapiens carbonic anhydrase IV
           protein.
          Length = 312

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 7   EAVRTSISKVRLRPHRKSIASSANKVHYKMEGTKTMKELGYIFDSNGQ--VRKIGADGQP 180
           E V  ++ +  ++ HR+ I + + K++Y  E T +MK+        GQ  V K GA G+P
Sbjct: 231 EKVVWTVFREPIQLHREQILAFSQKLYYDKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRP 290


>L10955-2|AAA35626.1|  222|Homo sapiens carbonic anhydrase IV
           protein.
          Length = 222

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 7   EAVRTSISKVRLRPHRKSIASSANKVHYKMEGTKTMKELGYIFDSNGQ--VRKIGADGQP 180
           E V  ++ +  ++ HR+ I + + K++Y  E T +MK+        GQ  V K GA G+P
Sbjct: 141 EKVVWTVFREPIQLHREQILAFSQKLYYDKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRP 200


>L10955-1|AAA35625.1|  294|Homo sapiens carbonic anhydrase IV
           protein.
          Length = 294

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 7   EAVRTSISKVRLRPHRKSIASSANKVHYKMEGTKTMKELGYIFDSNGQ--VRKIGADGQP 180
           E V  ++ +  ++ HR+ I + + K++Y  E T +MK+        GQ  V K GA G+P
Sbjct: 213 EKVVWTVFREPIQLHREQILAFSQKLYYDKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRP 272


>CR541766-1|CAG46565.1|  312|Homo sapiens CA4 protein.
          Length = 312

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 7   EAVRTSISKVRLRPHRKSIASSANKVHYKMEGTKTMKELGYIFDSNGQ--VRKIGADGQP 180
           E V  ++ +  ++ HR+ I + + K++Y  E T +MK+        GQ  V K GA G+P
Sbjct: 231 EKVVWTVFREPIQLHREQILAFSQKLYYDKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRP 290


>BC074768-1|AAH74768.1|  312|Homo sapiens carbonic anhydrase IV
           protein.
          Length = 312

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 7   EAVRTSISKVRLRPHRKSIASSANKVHYKMEGTKTMKELGYIFDSNGQ--VRKIGADGQP 180
           E V  ++ +  ++ HR+ I + + K++Y  E T +MK+        GQ  V K GA G+P
Sbjct: 231 EKVVWTVFREPIQLHREQILAFSQKLYYDKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRP 290


>BC069649-1|AAH69649.1|  312|Homo sapiens carbonic anhydrase IV
           protein.
          Length = 312

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 7   EAVRTSISKVRLRPHRKSIASSANKVHYKMEGTKTMKELGYIFDSNGQ--VRKIGADGQP 180
           E V  ++ +  ++ HR+ I + + K++Y  E T +MK+        GQ  V K GA G+P
Sbjct: 231 EKVVWTVFREPIQLHREQILAFSQKLYYDKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRP 290


>BC057792-1|AAH57792.1|  312|Homo sapiens carbonic anhydrase IV
           protein.
          Length = 312

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 7   EAVRTSISKVRLRPHRKSIASSANKVHYKMEGTKTMKELGYIFDSNGQ--VRKIGADGQP 180
           E V  ++ +  ++ HR+ I + + K++Y  E T +MK+        GQ  V K GA G+P
Sbjct: 231 EKVVWTVFREPIQLHREQILAFSQKLYYDKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRP 290


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,480,022
Number of Sequences: 237096
Number of extensions: 1232975
Number of successful extensions: 2313
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2312
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)