Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0664
         (435 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    23   0.95 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   0.95 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   0.95 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   1.7  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   2.9  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   2.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   5.1  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -1

Query: 318 SKVFGDDDIEVNEVKKTDK 262
           SKVFG+D+  + ++ K++K
Sbjct: 100 SKVFGNDEKALEQIAKSEK 118


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -1

Query: 318 SKVFGDDDIEVNEVKKTDK 262
           SKVFG+D+  + ++ K++K
Sbjct: 160 SKVFGNDEKALEQIAKSEK 178


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -1

Query: 318 SKVFGDDDIEVNEVKKTDK 262
           SKVFG+D+  + ++ K++K
Sbjct: 160 SKVFGNDEKALEQIAKSEK 178


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +2

Query: 233 SNIIVFFKRYLSVFLTSL 286
           S++ VFFKR+L V+++ L
Sbjct: 164 SDLGVFFKRFLPVYVSYL 181


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 130 TPQPDTVRDTLAYIP 86
           TP+PD + + L ++P
Sbjct: 353 TPEPDCIHELLGHMP 367


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 315 KVFGDDDIEVNEVKKTDK 262
           KVFG+D+  + ++ K++K
Sbjct: 1   KVFGNDEKALEQIAKSEK 18


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 200 LRIRSAIKMDPY*T 159
           LR+R  IK+DP+ T
Sbjct: 175 LRLREEIKVDPFMT 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,866
Number of Sequences: 336
Number of extensions: 1739
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)