Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0664
         (435 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0758 + 5623953-5624171,5624251-5624430,5624533-5624591,562...    27   8.7  

>02_01_0758 +
           5623953-5624171,5624251-5624430,5624533-5624591,
           5625243-5625390,5625476-5625547,5625636-5625746,
           5626615-5626882,5627222-5627265,5627393-5627477,
           5627554-5627600
          Length = 410

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -1

Query: 330 SLTESKVFGDDDIEVNEVKKTD-KYLLKKTIIFDSLVKENTYK 205
           S T SK+ GD  ++ N+ +K + +   K+T + DS  K  T K
Sbjct: 118 SSTGSKINGDSSVDRNKAEKQEPRSSTKETSLEDSKEKRKTQK 160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,309,192
Number of Sequences: 37544
Number of extensions: 153240
Number of successful extensions: 326
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 326
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)