Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0664
         (435 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268067-1|AAQ56703.1|  666|Drosophila melanogaster UDP-GalNAc:p...    31   0.89 
AY061629-1|AAL29177.1|  666|Drosophila melanogaster SD10722p pro...    31   0.89 
AE014296-514|AAF47690.1|  666|Drosophila melanogaster CG2103-PB,...    31   0.89 
AE014296-513|AAF47689.1|  666|Drosophila melanogaster CG2103-PA,...    31   0.89 
AY060437-1|AAL25476.1|  276|Drosophila melanogaster LD46538p pro...    28   4.8  
AE014296-1724|AAS65049.1|  276|Drosophila melanogaster CG18177-P...    28   4.8  

>AY268067-1|AAQ56703.1|  666|Drosophila melanogaster
           UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
           protein.
          Length = 666

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 209 YVFSLTRLSNIIVFFKRYLSVFLTSLTS-ISSSPKTL 316
           YV  L  +S II+F+  YLSV + S+ S I+ SP  L
Sbjct: 197 YVAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPEL 233


>AY061629-1|AAL29177.1|  666|Drosophila melanogaster SD10722p
           protein.
          Length = 666

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 209 YVFSLTRLSNIIVFFKRYLSVFLTSLTS-ISSSPKTL 316
           YV  L  +S II+F+  YLSV + S+ S I+ SP  L
Sbjct: 197 YVAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPEL 233


>AE014296-514|AAF47690.1|  666|Drosophila melanogaster CG2103-PB,
           isoform B protein.
          Length = 666

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 209 YVFSLTRLSNIIVFFKRYLSVFLTSLTS-ISSSPKTL 316
           YV  L  +S II+F+  YLSV + S+ S I+ SP  L
Sbjct: 197 YVAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPEL 233


>AE014296-513|AAF47689.1|  666|Drosophila melanogaster CG2103-PA,
           isoform A protein.
          Length = 666

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 209 YVFSLTRLSNIIVFFKRYLSVFLTSLTS-ISSSPKTL 316
           YV  L  +S II+F+  YLSV + S+ S I+ SP  L
Sbjct: 197 YVAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPEL 233


>AY060437-1|AAL25476.1|  276|Drosophila melanogaster LD46538p
           protein.
          Length = 276

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +3

Query: 9   LSDAXEVFRALSGFKVRNRSLYRDRSGMYANVSRTVS 119
           +SD+ E++  LSGF ++++ +  D  G  A+V   +S
Sbjct: 106 MSDSDELYTRLSGFPMQDKGILPDSMGRSADVGYILS 142


>AE014296-1724|AAS65049.1|  276|Drosophila melanogaster CG18177-PA,
           isoform A protein.
          Length = 276

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +3

Query: 9   LSDAXEVFRALSGFKVRNRSLYRDRSGMYANVSRTVS 119
           +SD+ E++  LSGF ++++ +  D  G  A+V   +S
Sbjct: 106 MSDSDELYTRLSGFPMQDKGILPDSMGRSADVGYILS 142


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,512,697
Number of Sequences: 53049
Number of extensions: 290024
Number of successful extensions: 703
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)