Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0663
(395 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 85 3e-17
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 84 3e-17
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 84 5e-17
09_06_0359 + 22508900-22509439 77 4e-15
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 76 9e-15
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 74 5e-14
10_01_0309 + 3417602-3418147 69 1e-12
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 69 2e-12
02_01_0160 + 1116160-1116678 69 2e-12
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 68 3e-12
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 66 7e-12
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 61 4e-10
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 59 1e-09
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 54 3e-08
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 49 1e-06
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 49 2e-06
06_01_0214 + 1634171-1634173,1634263-1634742 49 2e-06
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 40 0.001
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 37 0.007
02_01_0086 + 613113-613532 37 0.007
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 36 0.009
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 30 0.78
10_01_0310 + 3425099-3425218 29 1.8
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 28 3.1
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 27 4.1
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 84.6 bits (200), Expect = 3e-17
Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = +1
Query: 13 KVTHKVSFDMKIGDD---NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 183
K+T+KV FD+ IG+ N+G +VIGL+G VP+T ENF L +G GYKGS FHRVI
Sbjct: 80 KITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVI 139
Query: 184 KNFMIQXXXXXXXXXXXXRSIYGDVLK 264
K+FMIQ +SIYG K
Sbjct: 140 KDFMIQGGDFDKGNGTGGKSIYGRTFK 166
Score = 79.4 bits (187), Expect = 1e-15
Identities = 36/46 (78%), Positives = 39/46 (84%)
Frame = +3
Query: 258 FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
F+DENFKL H G G +SMANAG +TNGSQFFI TV TPWLDGRHVV
Sbjct: 165 FKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDGRHVV 210
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 84.2 bits (199), Expect = 3e-17
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +3
Query: 255 RFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
+F DENFK+KH G G LSMANAG+DTNGSQFFITTV T WLDG+HVV
Sbjct: 136 KFADENFKIKHTGPGLLSMANAGRDTNGSQFFITTVTTSWLDGKHVV 182
Score = 75.4 bits (177), Expect = 2e-14
Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Frame = +1
Query: 13 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKF 171
+VTHKV FD++I G +V+GLFGKTVPKT ENF L +G G +KGS F
Sbjct: 48 EVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAF 107
Query: 172 HRVIKNFMIQXXXXXXXXXXXXRSIYG 252
HR+I +FMIQ SIYG
Sbjct: 108 HRIIPSFMIQGGDFTLGDGRGGESIYG 134
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 83.8 bits (198), Expect = 5e-17
Identities = 40/81 (49%), Positives = 50/81 (61%)
Frame = +1
Query: 13 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNF 192
KV K FD+++G + G IVIGLFG+ VPKT +NF L +G GYKG FHR+IK+F
Sbjct: 63 KVNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDF 122
Query: 193 MIQXXXXXXXXXXXXRSIYGD 255
MIQ RSIYG+
Sbjct: 123 MIQGGDFQNNNGTGGRSIYGE 143
Score = 60.9 bits (141), Expect = 4e-10
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3
Query: 258 FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 362
F+DENF LKH G G LSMANAG DTNGSQFFI TV
Sbjct: 145 FDDENFTLKHTGPGVLSMANAGPDTNGSQFFICTV 179
>09_06_0359 + 22508900-22509439
Length = 179
Score = 77.4 bits (182), Expect = 4e-15
Identities = 35/47 (74%), Positives = 38/47 (80%)
Frame = +3
Query: 255 RFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
RF DENFKL+H G G LSMANAG +TNGSQFFI T T WLDG+HVV
Sbjct: 91 RFADENFKLRHTGPGVLSMANAGPNTNGSQFFICTTRTTWLDGKHVV 137
Score = 64.5 bits (150), Expect = 3e-11
Identities = 38/84 (45%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +1
Query: 25 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 183
KV FD+ IG G +V+ LF TVPKT ENF L +G G YKGS FHR+I
Sbjct: 7 KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRII 66
Query: 184 KNFMIQXXXXXXXXXXXXRSIYGD 255
NFM Q SIYGD
Sbjct: 67 PNFMCQGGDFTRGNGTGGESIYGD 90
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 76.2 bits (179), Expect = 9e-15
Identities = 36/46 (78%), Positives = 37/46 (80%)
Frame = +3
Query: 258 FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
FEDENF LKH G LSMANAG DTNGSQFFITT TP LDG+HVV
Sbjct: 134 FEDENFVLKHERKGMLSMANAGPDTNGSQFFITTTRTPHLDGKHVV 179
Score = 35.9 bits (79), Expect = 0.012
Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 22/94 (23%)
Frame = +1
Query: 37 DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEG----------------------E 150
D+ IG D G IV+ L+ P+T ENF L +G
Sbjct: 38 DVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKISLKAASVCTR 97
Query: 151 GYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYG 252
KGS HR++K FM+Q SIYG
Sbjct: 98 WTKGSCIHRIVKGFMVQGGDITAGDGTGGESIYG 131
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 73.7 bits (173), Expect = 5e-14
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 255 RFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
+FEDENF LKH G LSMAN+G +TNGSQFFITT TP LDG+HVV
Sbjct: 151 KFEDENFVLKHERKGMLSMANSGPNTNGSQFFITTTRTPHLDGKHVV 197
Score = 35.5 bits (78), Expect = 0.016
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = +1
Query: 37 DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNF 192
D+ IG + G IVI L+ VP+T ENF L +G G K H K+F
Sbjct: 31 DVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVGAVTGK-HLHYKDF 81
Score = 31.5 bits (68), Expect = 0.25
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 157 KGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYG 252
+GS FHRVIK FM+Q SIYG
Sbjct: 118 QGSCFHRVIKGFMVQGGDITAGDGTGGESIYG 149
>10_01_0309 + 3417602-3418147
Length = 181
Score = 68.9 bits (161), Expect = 1e-12
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +3
Query: 258 FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHV 392
F DE F +KH G G +SMANAG +TNGSQFFIT PWLDGRHV
Sbjct: 100 FPDEGFAVKHDGPGVVSMANAGPNTNGSQFFITVDKAPWLDGRHV 144
Score = 46.4 bits (105), Expect = 8e-06
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +1
Query: 13 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--QKPEGEG-----YKGSKF 171
K +V D+ IG + +G +VI L VP T ENF +L ++ G YKGS F
Sbjct: 8 KSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAF 67
Query: 172 HRVIKNFMIQ 201
HRV+ FM Q
Sbjct: 68 HRVVPGFMCQ 77
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 68.5 bits (160), Expect = 2e-12
Identities = 40/87 (45%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Frame = +1
Query: 13 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKF 171
KVT KV FD+ I G IV+GLFG TVPKT ENF + +G G YKG+ F
Sbjct: 37 KVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPF 96
Query: 172 HRVIKNFMIQXXXXXXXXXXXXRSIYG 252
HR+I FMIQ SIYG
Sbjct: 97 HRIIPGFMIQGGDTVSGNGTGCDSIYG 123
Score = 67.3 bits (157), Expect = 4e-12
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = +3
Query: 258 FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
F DENFK+ H G LSMAN KDTNGSQFFITTV LDG+HVV
Sbjct: 126 FPDENFKINHSAPGLLSMANYAKDTNGSQFFITTVKLTRLDGKHVV 171
>02_01_0160 + 1116160-1116678
Length = 172
Score = 68.5 bits (160), Expect = 2e-12
Identities = 32/47 (68%), Positives = 35/47 (74%)
Frame = +3
Query: 255 RFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
+F DE FK KH G LSMANAG +TNGSQFFI TV WLDG+HVV
Sbjct: 89 KFADEVFKFKHDSPGILSMANAGPNTNGSQFFICTVPCSWLDGKHVV 135
Score = 59.7 bits (138), Expect = 8e-10
Identities = 35/84 (41%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Frame = +1
Query: 25 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 183
+V FDM +G G IV+ L+ K VP+T ENF L +G G YKGS FHRVI
Sbjct: 5 RVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVI 64
Query: 184 KNFMIQXXXXXXXXXXXXRSIYGD 255
FM Q SIYG+
Sbjct: 65 PEFMCQGGDFTRGNGTGGESIYGE 88
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 67.7 bits (158), Expect = 3e-12
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Frame = +1
Query: 10 PKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSK 168
P VT++V D++I +IG IVIGL+G VPKT NF L EG G YKGS+
Sbjct: 34 PAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSR 93
Query: 169 FHRVIKNFMIQ 201
FHR+I FMIQ
Sbjct: 94 FHRIIPGFMIQ 104
Score = 52.8 bits (121), Expect = 1e-07
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 303 LSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
++MAN+G D+NGSQF+ITT+ T WLDG HVV
Sbjct: 118 IAMANSGPDSNGSQFYITTIKTSWLDGEHVV 148
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 66.5 bits (155), Expect = 7e-12
Identities = 36/54 (66%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = +3
Query: 240 QYIW*R-FEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
Q IW R FEDE K L+H LSMANAG +TNGSQFFITTV TPWLD +H V
Sbjct: 559 QSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTV 612
Score = 34.3 bits (75), Expect = 0.036
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 58 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 201
++G I + L+ + PKT ENF + Y FHRVIK FMIQ
Sbjct: 503 SMGDIHLRLYPEECPKTVENFTTHCRNGY---YDNLIFHRVIKGFMIQ 547
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 60.9 bits (141), Expect = 4e-10
Identities = 39/89 (43%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +1
Query: 1 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA---QKPEG--EGYKGS 165
P PK V FD+ IG G I + LF VPKT ENF Q + G +GYKG
Sbjct: 31 PPNPK-NPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGC 89
Query: 166 KFHRVIKNFMIQXXXXXXXXXXXXRSIYG 252
+FHRVIK+FMIQ SIYG
Sbjct: 90 QFHRVIKDFMIQGGDYMKGDGTGCTSIYG 118
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 255 RFEDENFKLKHYGAGWLSMANA 320
+F+DENF KH G G LSM +
Sbjct: 120 KFDDENFIAKHTGPGLLSMVRS 141
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 342 QFFITTV*TPWLDGRHVV 395
QFFIT WLD +HVV
Sbjct: 200 QFFITCAKCEWLDNKHVV 217
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 59.3 bits (137), Expect = 1e-09
Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +3
Query: 255 RFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
+FEDE +LKH GAG LSMANAG +TNGSQFFIT LDG+H +
Sbjct: 79 KFEDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAPCQSLDGKHTI 126
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +1
Query: 52 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 201
+ ++G I ++ K PKT NF +L+++ Y FHR+IK+F++Q
Sbjct: 15 ETSMGAFTIEMYYKHAPKTCRNFLELSRRGY---YDNVIFHRIIKDFIVQ 61
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 54.4 bits (125), Expect = 3e-08
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = +3
Query: 258 FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
FEDENF L+H G LSMANAG +TNGSQFFIT LD + V
Sbjct: 94 FEDENFVLRHDERGLLSMANAGPNTNGSQFFITFKHNSRLDRKSTV 139
Score = 50.8 bits (116), Expect = 4e-07
Identities = 33/83 (39%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Frame = +1
Query: 28 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVI 183
V D+ IGD+ +V LF P+T ENF L G G YKGS FHRVI
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVI 68
Query: 184 KNFMIQXXXXXXXXXXXXRSIYG 252
K FM Q SIYG
Sbjct: 69 KGFMAQGGDFSNGDGSGGESIYG 91
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 49.2 bits (112), Expect = 1e-06
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +3
Query: 246 IW*R-FEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
IW + F+DE N KL H G G +SMAN+G TNGSQFFI P L+ +H V
Sbjct: 410 IWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTV 461
Score = 33.5 bits (73), Expect = 0.063
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +1
Query: 64 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 201
G + + L P+T ENF E Y G FHR IKNFMIQ
Sbjct: 354 GDLNLELHCDITPRTCENFLTHC---ENGYYNGLIFHRSIKNFMIQ 396
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 48.8 bits (111), Expect = 2e-06
Identities = 31/75 (41%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Frame = +1
Query: 1 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------Y 156
PK K H V FD+ IG I LF VPKTTENF L G G +
Sbjct: 2 PKAKKNPH-VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLYF 60
Query: 157 KGSKFHRVIKNFMIQ 201
KG+ HR++K FM Q
Sbjct: 61 KGTNMHRILKGFMAQ 75
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 255 RFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
+F DE LKH G +SMAN+G +TNGSQFFIT P L+G + V
Sbjct: 70 KFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGHYTV 117
Score = 37.5 bits (83), Expect = 0.004
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = +1
Query: 58 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 201
N+G I +F P+T ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEVFCDQAPRTAENFLALCASGY---YDGTIFHRNIKGFMIQ 52
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1
Query: 64 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 201
G + I L+ K PK NF QL EG Y G+ FHRVIK+F++Q
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQ 64
Score = 33.1 bits (72), Expect = 0.083
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +3
Query: 258 FEDE-NFKLKHYGAGWLSMANAGKD-TNGSQFFITTV*TPWLDGRHVV 395
F DE + +L+ G ++ ANAG +NGSQFFI+ WLD ++ +
Sbjct: 83 FADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKKNTI 130
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 36.7 bits (81), Expect = 0.007
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Frame = +3
Query: 258 FEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFIT-TV*TPWLDGRHVV 395
F+DE + +L+H G ++MA+AG++ N SQF+IT +LD +H V
Sbjct: 108 FDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTV 155
>02_01_0086 + 613113-613532
Length = 139
Score = 36.7 bits (81), Expect = 0.007
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = +3
Query: 216 QG*WNWRAQYIW*RFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV*TPWLDGRHVV 395
QG W+ R ++ +ENF L H WL N + N SQFF T V PW DG +VV
Sbjct: 47 QGPWHRRRVHLRRHLPNENFLLPH-DRPWL--PNGSAENNISQFF-TRV--PWFDGNYVV 100
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 36.3 bits (80), Expect = 0.009
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Frame = +3
Query: 255 RFEDENFK--LKHYGAGWLSMANAGKDTNGSQFFIT-TV*TPWLDGRHVV 395
RF D+ + L+H G ++MA+AG++ N SQF+IT +LD +H V
Sbjct: 76 RFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYLDDKHTV 125
Score = 33.1 bits (72), Expect = 0.083
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 58 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 201
++G I + L P TT+NF +L + + Y G FH+V K+F+ Q
Sbjct: 8 SVGDIEVDLHTDMCPLTTKNFLKLCKM---KYYNGCLFHKVEKDFLAQ 52
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 29.9 bits (64), Expect = 0.78
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -3
Query: 264 LQNVTIYTAPSSSITLGKITTLDHEIFN---YSVELAPFVPLPLRFLS 130
L VTI A + S+ T LD ++FN +++ PFVPL L+ L+
Sbjct: 135 LNLVTIVFASNISVVKEAETMLDPDLFNVLRFTISAIPFVPLLLKALN 182
>10_01_0310 + 3425099-3425218
Length = 39
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 64 GTIVIGLFGKTVPKTTENF 120
G++VI F VPKTTENF
Sbjct: 8 GSVVIEQFADKVPKTTENF 26
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 64 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 201
G+I I ++ + F L + +KG F VIKNF+IQ
Sbjct: 103 GSITIEIYKDASADVVDRFVSLCKSNH---FKGMPFRHVIKNFVIQ 145
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 64 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 201
G I G F PKT E+ ++L + Y + F RV K F+ Q
Sbjct: 84 GDIEFGFFPHVAPKTVEHIYKLVRL---GCYNTNHFFRVDKGFVAQ 126
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,997,609
Number of Sequences: 37544
Number of extensions: 190945
Number of successful extensions: 403
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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