BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--0662 (307 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 156 1e-37 UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 139 1e-32 UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 134 3e-31 UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 119 1e-26 UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 107 5e-23 UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 1e-14 UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 53 1e-06 UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 48 5e-05 UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.002 UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 42 0.003 UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 42 0.004 UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 39 0.019 UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 37 0.10 UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 35 0.41 UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 34 0.54 UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep: MA... 33 1.2 UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 33 1.2 UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 33 1.2 UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 32 2.2 UniRef50_Q4QAT3 Cluster: Hypothetical predicted Kelch-domain pro... 31 6.7 UniRef50_A7RJK7 Cluster: Predicted protein; n=1; Nematostella ve... 30 8.8 UniRef50_Q8TVX9 Cluster: Predicted DNA methylase containing a Zn... 30 8.8 UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 30 8.8 >UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila melanogaster (Fruit fly) Length = 256 Score = 156 bits (378), Expect = 1e-37 Identities = 73/98 (74%), Positives = 81/98 (82%) Frame = +2 Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 187 MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60 Query: 188 VHXRDPYKFKTRKELFIAPEGLSQANLFIVXRKQLLKL 301 VH RDPY++K RKELFIAPEG+ RK L++ Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQI 98 Score = 38.3 bits (85), Expect = 0.033 Identities = 14/17 (82%), Positives = 17/17 (100%) Frame = +1 Query: 256 TGQFVYCGKKATLEVGN 306 TGQFVYCG+KATL++GN Sbjct: 84 TGQFVYCGRKATLQIGN 100 >UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular organisms|Rep: 60S ribosomal protein L8 - Homo sapiens (Human) Length = 257 Score = 139 bits (336), Expect = 1e-32 Identities = 65/98 (66%), Positives = 75/98 (76%) Frame = +2 Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 187 MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60 Query: 188 VHXRDPYKFKTRKELFIAPEGLSQANLFIVXRKQLLKL 301 V RDPY+FK R ELFIA EG+ +K L + Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNI 98 Score = 36.3 bits (80), Expect = 0.13 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = +1 Query: 256 TGQFVYCGKKATLEVGN 306 TGQFVYCGKKA L +GN Sbjct: 84 TGQFVYCGKKAQLNIGN 100 >UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: Ribosomal protein - Codakia orbicularis Length = 234 Score = 134 bits (325), Expect = 3e-31 Identities = 62/98 (63%), Positives = 74/98 (75%) Frame = +2 Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 187 MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60 Query: 188 VHXRDPYKFKTRKELFIAPEGLSQANLFIVXRKQLLKL 301 V RDPYK+K R E FIA EG+ +K L++ Sbjct: 61 VTFRDPYKYKMRTETFIATEGMYTGQFIYCGKKANLQI 98 >UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Eukaryota|Rep: 60S ribosomal protein KD4/L2 - Arabidopsis thaliana (Mouse-ear cress) Length = 123 Score = 119 bits (286), Expect = 1e-26 Identities = 58/96 (60%), Positives = 69/96 (71%) Frame = +2 Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 187 MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60 Query: 188 VHXRDPYKFKTRKELFIAPEGLSQANLFIVXRKQLL 295 V R P++FK +KELF+ E + + +K L Sbjct: 61 VTFRHPFRFKKQKELFVXXEVCTPVSSLYCGKKATL 96 >UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma japonicum|Rep: SJCHGC07017 protein - Schistosoma japonicum (Blood fluke) Length = 112 Score = 107 bits (257), Expect = 5e-23 Identities = 49/69 (71%), Positives = 57/69 (82%) Frame = +2 Query: 20 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHXR 199 IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V R Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60 Query: 200 DPYKFKTRK 226 D Y +K K Sbjct: 61 DVYSYKLIK 69 >UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 protein - Rattus norvegicus (Rat) Length = 47 Score = 79.4 bits (187), Expect = 1e-14 Identities = 35/46 (76%), Positives = 41/46 (89%) Frame = +2 Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 145 MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46 >UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba histolytica|Rep: 60S ribosomal protein L8 - Entamoeba histolytica Length = 158 Score = 52.8 bits (121), Expect = 1e-06 Identities = 25/41 (60%), Positives = 30/41 (73%) Frame = +2 Query: 131 KGVVKDIIHDPGRGAPLAVVHXRDPYKFKTRKELFIAPEGL 253 +G+VK I HDPGRGAPLA V R+P ++ KELFI EGL Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGL 73 Score = 34.7 bits (76), Expect = 0.41 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = +1 Query: 217 DKEGALHCSRRALTGQFVYCGKKATLEVGN 306 DKE + C+ +GQ++YCG KA+L +GN Sbjct: 63 DKELFI-CAEGLYSGQYIYCGSKASLHIGN 91 >UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryarchaeota|Rep: 50S ribosomal protein L2P - Methanopyrus kandleri Length = 243 Score = 47.6 bits (108), Expect = 5e-05 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +2 Query: 8 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 184 MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60 Query: 185 VVHXRDPYKFKTRKELFIAPEG 250 V D + L + PEG Sbjct: 61 RVRFED-----GEERLILVPEG 77 >UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_3264, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 66 Score = 42.7 bits (96), Expect = 0.002 Identities = 19/24 (79%), Positives = 20/24 (83%) Frame = +2 Query: 8 MGRVIRAQRKGAGSVFVSHTKKRK 79 MGRVIRAQRKG GS+F SHT RK Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24 >UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus tokodaii Length = 238 Score = 41.9 bits (94), Expect = 0.003 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Frame = +2 Query: 8 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 184 MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55 Query: 185 VVHXRDPYKF 214 ++ D KF Sbjct: 56 LIKLDDGTKF 65 >UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella natans|Rep: Ribosomal protein L8 - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 281 Score = 41.5 bits (93), Expect = 0.004 Identities = 25/82 (30%), Positives = 38/82 (46%) Frame = +2 Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 187 MG++I AQRKG + +R G +S+ E++ IKG++ D + P Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86 Query: 188 VHXRDPYKFKTRKELFIAPEGL 253 + FK EL+IA E L Sbjct: 87 IKFNVTKYFKNYYELYIAVEKL 108 >UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermoproteales|Rep: 50S ribosomal protein L2P - Pyrobaculum aerophilum Length = 246 Score = 39.1 bits (87), Expect = 0.019 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +2 Query: 8 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 184 MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56 Query: 185 VVHXRDPYKF 214 + + +F Sbjct: 57 KIVTENGVEF 66 >UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum pernix Length = 238 Score = 36.7 bits (81), Expect = 0.10 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = +2 Query: 8 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 184 MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56 Query: 185 VVHXRDPYKF 214 V D +F Sbjct: 57 RVVREDGVEF 66 >UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep: Ribosomal protein L2 - Carsonella ruddii Length = 235 Score = 34.7 bits (76), Expect = 0.41 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 35 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHXRDPYK 211 + G + V H K K R +D+ IKG+V+ I +DP R A +A++ D K Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK 75 >UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina acetivorans Length = 238 Score = 34.3 bits (75), Expect = 0.54 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Frame = +2 Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 187 MG+ + +Q +G G+ K LR + + ++G V I HDP R AP+A Sbjct: 1 MGKRLISQNRGRGTP-TYRAPSHKYKADLRH-PRVDENSSLRGEVVGIEHDPARSAPIAK 58 Query: 188 VHXRDPYKFKTRKELF-IAPEGLSQANL 268 V F+ +ELF +A EG++ N+ Sbjct: 59 V------AFENGEELFLLASEGIAVGNI 80 >UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep: MAP4K1 protein - Bos taurus (Bovine) Length = 847 Score = 33.1 bits (72), Expect = 1.2 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = +2 Query: 68 KKRKGAPKLRSLDYAERHGYIKGVVKDII---HDPGRGAPLAVVHXRDP 205 KKR A K+ + + G +G++ D++ +PG+GAP+ + DP Sbjct: 287 KKRPSATKMLTHQLVSQPGLNRGLILDLLDKLRNPGKGAPVGEIEDEDP 335 >UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum symbiosum Length = 243 Score = 33.1 bits (72), Expect = 1.2 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = +2 Query: 8 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 184 MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57 Query: 185 VVHXRD 202 + D Sbjct: 58 KIRFED 63 >UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermoplasmatales|Rep: 50S ribosomal protein L2P - Thermoplasma volcanium Length = 234 Score = 33.1 bits (72), Expect = 1.2 Identities = 23/58 (39%), Positives = 31/58 (53%) Frame = +2 Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 181 MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL 51 >UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein L2P - Ignicoccus hospitalis KIN4/I Length = 251 Score = 32.3 bits (70), Expect = 2.2 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +2 Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAP-KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 184 MG+ +R QR G G+ + + AP + S + + +G V ++ HDPGR PLA Sbjct: 1 MGKRLRVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLA 60 >UniRef50_Q4QAT3 Cluster: Hypothetical predicted Kelch-domain protein; n=3; Leishmania|Rep: Hypothetical predicted Kelch-domain protein - Leishmania major Length = 1220 Score = 30.7 bits (66), Expect = 6.7 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Frame = +1 Query: 163 WXRCTFG----CCTLXRSIQVQDKEGALHCSRRALTGQFVYCGKKATLE 297 W RC F CT R+ +++DK A R+ +G CG + TL+ Sbjct: 698 WNRCVFEKHIRSCTKSRAAEMEDKATAAAAMERSGSGWCTGCGGQVTLQ 746 >UniRef50_A7RJK7 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 551 Score = 30.3 bits (65), Expect = 8.8 Identities = 13/37 (35%), Positives = 24/37 (64%) Frame = -3 Query: 128 CIHDVQRNLKSEV*ERLSSSSCEKRKLNRHPYAEHVL 18 C++ + RNL S +R++SSS +R + HP+ ++L Sbjct: 197 CVY-ITRNLNSGEYKRMTSSSSRRRAIRYHPFLGNIL 232 >UniRef50_Q8TVX9 Cluster: Predicted DNA methylase containing a Zn-ribbon module; n=3; Methanopyrus kandleri|Rep: Predicted DNA methylase containing a Zn-ribbon module - Methanopyrus kandleri Length = 948 Score = 30.3 bits (65), Expect = 8.8 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +2 Query: 65 TKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHXRDPYKF-KTRKELF 235 T +R+ +L + + HG+++ + I+ GRG RD F + R+ELF Sbjct: 292 TIQREQVHRLSRRHFEDEHGFVRAYLAAIVEGSGRGKEYRAATDRDLEFFERAREELF 349 >UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2 - Candidatus Nitrosopumilus maritimus SCM1 Length = 244 Score = 30.3 bits (65), Expect = 8.8 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Frame = +2 Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 181 MG+ +R+G G T K K +E+H +G + D++H+ GR APL Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57 Query: 182 AVVHXRD 202 A V D Sbjct: 58 AKVRFED 64 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 283,240,338 Number of Sequences: 1657284 Number of extensions: 5021031 Number of successful extensions: 11613 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 11471 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11612 length of database: 575,637,011 effective HSP length: 78 effective length of database: 446,368,859 effective search space used: 10266483757 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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