Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0662
(307 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT014913-1|AAT47764.1| 256|Drosophila melanogaster RH21963p pro... 156 6e-39
AY071342-1|AAL48964.1| 256|Drosophila melanogaster RE37829p pro... 156 6e-39
AF098520-1|AAF06828.1| 256|Drosophila melanogaster ribosomal pr... 156 6e-39
AE014296-477|AAF47660.1| 256|Drosophila melanogaster CG1263-PB,... 156 6e-39
AE014296-476|AAF47659.1| 256|Drosophila melanogaster CG1263-PA,... 156 6e-39
BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p pro... 79 8e-16
AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA... 27 3.4
AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB... 27 3.4
>BT014913-1|AAT47764.1| 256|Drosophila melanogaster RH21963p
protein.
Length = 256
Score = 156 bits (378), Expect = 6e-39
Identities = 73/98 (74%), Positives = 81/98 (82%)
Frame = +2
Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 187
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 188 VHXRDPYKFKTRKELFIAPEGLSQANLFIVXRKQLLKL 301
VH RDPY++K RKELFIAPEG+ RK L++
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQI 98
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +1
Query: 256 TGQFVYCGKKATLEVGN 306
TGQFVYCG+KATL++GN
Sbjct: 84 TGQFVYCGRKATLQIGN 100
>AY071342-1|AAL48964.1| 256|Drosophila melanogaster RE37829p
protein.
Length = 256
Score = 156 bits (378), Expect = 6e-39
Identities = 73/98 (74%), Positives = 81/98 (82%)
Frame = +2
Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 187
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 188 VHXRDPYKFKTRKELFIAPEGLSQANLFIVXRKQLLKL 301
VH RDPY++K RKELFIAPEG+ RK L++
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQI 98
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +1
Query: 256 TGQFVYCGKKATLEVGN 306
TGQFVYCG+KATL++GN
Sbjct: 84 TGQFVYCGRKATLQIGN 100
>AF098520-1|AAF06828.1| 256|Drosophila melanogaster ribosomal
protein L8 protein.
Length = 256
Score = 156 bits (378), Expect = 6e-39
Identities = 73/98 (74%), Positives = 81/98 (82%)
Frame = +2
Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 187
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 188 VHXRDPYKFKTRKELFIAPEGLSQANLFIVXRKQLLKL 301
VH RDPY++K RKELFIAPEG+ RK L++
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQI 98
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +1
Query: 256 TGQFVYCGKKATLEVGN 306
TGQFVYCG+KATL++GN
Sbjct: 84 TGQFVYCGRKATLQIGN 100
>AE014296-477|AAF47660.1| 256|Drosophila melanogaster CG1263-PB,
isoform B protein.
Length = 256
Score = 156 bits (378), Expect = 6e-39
Identities = 73/98 (74%), Positives = 81/98 (82%)
Frame = +2
Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 187
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 188 VHXRDPYKFKTRKELFIAPEGLSQANLFIVXRKQLLKL 301
VH RDPY++K RKELFIAPEG+ RK L++
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQI 98
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +1
Query: 256 TGQFVYCGKKATLEVGN 306
TGQFVYCG+KATL++GN
Sbjct: 84 TGQFVYCGRKATLQIGN 100
>AE014296-476|AAF47659.1| 256|Drosophila melanogaster CG1263-PA,
isoform A protein.
Length = 256
Score = 156 bits (378), Expect = 6e-39
Identities = 73/98 (74%), Positives = 81/98 (82%)
Frame = +2
Query: 8 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 187
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 188 VHXRDPYKFKTRKELFIAPEGLSQANLFIVXRKQLLKL 301
VH RDPY++K RKELFIAPEG+ RK L++
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQI 98
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +1
Query: 256 TGQFVYCGKKATLEVGN 306
TGQFVYCG+KATL++GN
Sbjct: 84 TGQFVYCGRKATLQIGN 100
>BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p
protein.
Length = 579
Score = 79.4 bits (187), Expect = 8e-16
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +2
Query: 143 KDIIHDPGRGAPLAVVHXRDPYKFKTRKELFIAPEGLSQANLFIVXRKQLLKL 301
KDIIHDPGRGAPLAVVH RDPY++K RKELFIAPEG+ RK L++
Sbjct: 1 KDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQI 53
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +1
Query: 256 TGQFVYCGKKATLEVGN 306
TGQFVYCG+KATL++GN
Sbjct: 39 TGQFVYCGRKATLQIGN 55
>AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA,
isoform A protein.
Length = 2602
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 134 GVVKDIIHDPGRGAPLA-VVHXRDPYKFKTRKELF 235
GVV ++ G G A + + R P+K + RKE+F
Sbjct: 1680 GVVSGVLMGSGSGGSTACLTYNRVPWKLRVRKEVF 1714
>AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB,
isoform B protein.
Length = 2693
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 134 GVVKDIIHDPGRGAPLA-VVHXRDPYKFKTRKELF 235
GVV ++ G G A + + R P+K + RKE+F
Sbjct: 1771 GVVSGVLMGSGSGGSTACLTYNRVPWKLRVRKEVF 1805
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,779,315
Number of Sequences: 53049
Number of extensions: 235700
Number of successful extensions: 493
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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