Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0655
(385 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_02_0020 - 8610425-8610710,8610716-8611140,8611393-8611463,861... 30 0.55
09_02_0010 - 2940063-2940688,2940825-2941746,2941752-2941964 29 1.7
08_01_0888 + 8719416-8719720,8719747-8720482 29 1.7
07_01_1139 - 10684647-10685837,10685877-10686251,10686351-106865... 29 1.7
04_01_0303 + 4132988-4133184,4133701-4134202,4134261-4134638,413... 29 1.7
05_03_0339 + 12659363-12659461,12659690-12660047,12660072-126604... 27 3.8
04_03_0423 + 15766965-15767612,15781082-15782299 27 3.8
04_03_0414 + 15633517-15634164,15647700-15648917 27 3.8
03_05_0735 - 27247767-27248285,27249030-27249318,27250594-27251093 27 3.8
12_01_0543 - 4271380-4272218,4272258-4272873 27 5.1
11_04_0179 + 14562288-14562860,14562874-14563489,14563529-145636... 27 5.1
11_02_0113 + 8453628-8453820,8453970-8454941,8455031-8455644 27 5.1
08_02_0132 + 12908995-12909437,12909727-12910211,12910417-129109... 27 5.1
05_01_0517 + 4403644-4403796,4404025-4404307,4404324-4404749,440... 27 5.1
04_03_0068 - 10631827-10631947,10632037-10632112,10632152-106330... 27 5.1
04_03_0050 + 10161245-10161363,10161557-10161686,10161868-101624... 27 5.1
04_01_0299 - 3995709-3996185,3996209-3997075,3997142-3997252,399... 27 5.1
01_06_1453 - 37465665-37466627 27 5.1
01_05_0043 + 17517940-17518563 27 5.1
01_04_0120 + 16242220-16242483,16242538-16243424,16244604-162452... 27 5.1
11_04_0026 - 12446179-12446399,12446604-12447303 27 6.7
11_01_0777 + 6494104-6494445,6494563-6495528,6495576-6495743 27 6.7
06_03_0033 + 15719864-15720049,15720139-15720601,15720638-157212... 27 6.7
05_03_0433 - 13972772-13973206 27 6.7
02_03_0049 + 14421408-14421942,14421988-14422842,14423847-144241... 27 6.7
02_03_0252 - 16882960-16884106,16884173-16884518,16892586-16892724 26 8.9
02_01_0293 + 1955439-1956457,1957002-1957322,1957405-1957411,195... 26 8.9
>04_02_0020 -
8610425-8610710,8610716-8611140,8611393-8611463,
8611503-8611878
Length = 385
Score = 30.3 bits (65), Expect = 0.55
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN++GN +N+ SLKD + A A+ +D
Sbjct: 27 GNNIGNFSNQPSLKDVVSAQAKTTD 51
>09_02_0010 - 2940063-2940688,2940825-2941746,2941752-2941964
Length = 586
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A AE +D
Sbjct: 306 GNNNGNFSNQPSLKDLVFAQAETTD 330
>08_01_0888 + 8719416-8719720,8719747-8720482
Length = 346
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 109 AGNSLGNAANKKSLKDKLGASAELSD 186
AGN+ GN +N+ SLKD + A A+ +D
Sbjct: 41 AGNNNGNFSNQPSLKDLVFAQAKTTD 66
>07_01_1139 -
10684647-10685837,10685877-10686251,10686351-10686534,
10686699-10686895
Length = 648
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +NK SLKD + A A+ +D
Sbjct: 211 GNNNGNFSNKPSLKDLVFAQAKTTD 235
>04_01_0303 +
4132988-4133184,4133701-4134202,4134261-4134638,
4134657-4135301
Length = 573
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 106 LAGNSLGNAANKKSLKDKLGASAELSD 186
L GN+ GN +N+ SLKD + A A+ +D
Sbjct: 139 LGGNNNGNFSNQPSLKDLVFAQAKTTD 165
>05_03_0339 +
12659363-12659461,12659690-12660047,12660072-12660464,
12660669-12661387
Length = 522
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 185 GNNKGNFSNQPSLKDLVFAQAKTTD 209
>04_03_0423 + 15766965-15767612,15781082-15782299
Length = 621
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 483 GNNNGNFSNQSSLKDLVFAQAKTTD 507
>04_03_0414 + 15633517-15634164,15647700-15648917
Length = 621
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 483 GNNNGNFSNQSSLKDLVFAQAKTTD 507
>03_05_0735 - 27247767-27248285,27249030-27249318,27250594-27251093
Length = 435
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 59 PSLSSPTARKDSAG*FWQGTAWAMRPTRRA*KISSVLQQSSAMGRAAMMN 208
P+ SSP A+ G +W+ W P RR L +S G+ +M++
Sbjct: 237 PTHSSPVAQLHPGGRWWKRPRWRRTPARRG---HVELSPTSLRGKLSMVD 283
>12_01_0543 - 4271380-4272218,4272258-4272873
Length = 484
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 107 GNNNGNFSNQHSLKDLVFAQAKTTD 131
>11_04_0179 +
14562288-14562860,14562874-14563489,14563529-14563658,
14563694-14564540
Length = 721
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 298 GNNNGNFSNQPSLKDLVFAKAKTTD 322
>11_02_0113 + 8453628-8453820,8453970-8454941,8455031-8455644
Length = 592
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 257 GNNNGNFSNQPSLKDLVFAQAKTTD 281
>08_02_0132 +
12908995-12909437,12909727-12910211,12910417-12910988,
12911080-12911211,12912184-12912939
Length = 795
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 211 GNNNGNFSNQPSLKDLVFAQAKTTD 235
>05_01_0517 +
4403644-4403796,4404025-4404307,4404324-4404749,
4404789-4405372,4417315-4417479,4417629-4417694
Length = 558
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 189 GNNNGNFSNQPSLKDLVFAQAKTTD 213
>04_03_0068 -
10631827-10631947,10632037-10632112,10632152-10633021,
10650975-10651599
Length = 563
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 400 GNNNGNFSNQPSLKDLVFAQAKTTD 424
>04_03_0050 +
10161245-10161363,10161557-10161686,10161868-10162456,
10162661-10162995
Length = 390
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 181 GNNNGNFSNQPSLKDLVFAQAKTTD 205
>04_01_0299 -
3995709-3996185,3996209-3997075,3997142-3997252,
3997535-3997888
Length = 602
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 239 GNNNGNFSNQPSLKDLVFAQAKTTD 263
>01_06_1453 - 37465665-37466627
Length = 320
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 190 PHR*ALLKHRAYLSGSSCWPHCPSCSLP 107
P +LL R Y G+ P+CP C P
Sbjct: 6 PRPPSLLVDRRYKQGAEAAPNCPRCDSP 33
>01_05_0043 + 17517940-17518563
Length = 207
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 26 GNNNGNFSNQPSLKDLVFAQAKTTD 50
>01_04_0120 +
16242220-16242483,16242538-16243424,16244604-16245264,
16245582-16245943,16246071-16246140,16246666-16246740
Length = 772
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 117 GNNNGNFSNQPSLKDLVFAQAKTTD 141
>11_04_0026 - 12446179-12446399,12446604-12447303
Length = 306
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 135 GNNNGNFSNQLSLKDLVFAQAKTTD 159
>11_01_0777 + 6494104-6494445,6494563-6495528,6495576-6495743
Length = 491
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN N+ SLKD + A A+ +D
Sbjct: 89 GNNNGNFCNQPSLKDLVFAQAKTTD 113
>06_03_0033 +
15719864-15720049,15720139-15720601,15720638-15721254,
15721300-15721869,15723625-15724140
Length = 783
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A +D
Sbjct: 218 GNNNGNFSNQPSLKDLVFAQANTTD 242
>05_03_0433 - 13972772-13973206
Length = 144
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 90 GNNNGNFSNQPSLKDLVIAQAKTTD 114
>02_03_0049 +
14421408-14421942,14421988-14422842,14423847-14424151,
14424469-14424984
Length = 736
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SLKD + A A+ +D
Sbjct: 27 GNNNGNFSNQPSLKDLVFAHAKTTD 51
>02_03_0252 - 16882960-16884106,16884173-16884518,16892586-16892724
Length = 543
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 112 GNSLGNAANKKSLKDKLGASAELSD 186
GN+ GN +N+ SL+D + A A+ +D
Sbjct: 300 GNNNGNFSNQPSLRDLIFAQAKTTD 324
>02_01_0293 +
1955439-1956457,1957002-1957322,1957405-1957411,
1957954-1958041,1958143-1958324,1958508-1958644,
1958790-1958856,1959132-1959246,1959390-1959501,
1960420-1960495,1960576-1960758,1961166-1961326,
1961463-1961532,1962721-1962928,1963015-1963304,
1963388-1963509,1963605-1963749,1964040-1964113,
1964464-1964911
Length = 1274
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 14 VTTRSDERRAWSW*MPSLSSPTARKDSAG 100
+T+ S++ + WSW + S ARKD G
Sbjct: 415 LTSISEDGKIWSWHLSFDKSACARKDKLG 443
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,766,225
Number of Sequences: 37544
Number of extensions: 120003
Number of successful extensions: 416
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 636799876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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