Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0655
         (385 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132701-1|AAI32702.1|  232|Homo sapiens chromosome 9 open readi...    31   1.3  
BC132699-1|AAI32700.1|  232|Homo sapiens chromosome 9 open readi...    31   1.3  
AK092588-1|BAC03921.1|  232|Homo sapiens protein ( Homo sapiens ...    31   1.3  

>BC132701-1|AAI32702.1|  232|Homo sapiens chromosome 9 open reading
           frame 106 protein.
          Length = 232

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -1

Query: 205 HHRCPPHR*ALLKHRAYLSGSSCWP--HCPSCSLPKLSG*VFPGCRAAQ*WHLPAPCTPL 32
           +H  P HR AL  H    +  +  P  HCP C +P   G    G R     H P PC PL
Sbjct: 151 NHVSPAHRQALRGHSLGSALRALMPGRHCPLC-VPCKRGCNLRGGRGK---HGPRPCCPL 206

Query: 31  VR 26
           +R
Sbjct: 207 LR 208


>BC132699-1|AAI32700.1|  232|Homo sapiens chromosome 9 open reading
           frame 106 protein.
          Length = 232

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -1

Query: 205 HHRCPPHR*ALLKHRAYLSGSSCWP--HCPSCSLPKLSG*VFPGCRAAQ*WHLPAPCTPL 32
           +H  P HR AL  H    +  +  P  HCP C +P   G    G R     H P PC PL
Sbjct: 151 NHVSPAHRQALRGHSLGSALRALMPGRHCPLC-VPCKRGCNLRGGRGK---HGPRPCCPL 206

Query: 31  VR 26
           +R
Sbjct: 207 LR 208


>AK092588-1|BAC03921.1|  232|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35269 fis, clone PROST2005466. ).
          Length = 232

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -1

Query: 205 HHRCPPHR*ALLKHRAYLSGSSCWP--HCPSCSLPKLSG*VFPGCRAAQ*WHLPAPCTPL 32
           +H  P HR AL  H    +  +  P  HCP C +P   G    G R     H P PC PL
Sbjct: 151 NHVSPAHRQALRGHSLGSALRALMPGRHCPLC-VPCKRGCDLRGGRGK---HGPRPCCPL 206

Query: 31  VR 26
           +R
Sbjct: 207 LR 208


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,027,196
Number of Sequences: 237096
Number of extensions: 642300
Number of successful extensions: 1543
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)