Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0655
         (385 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118362-1|AAM48391.1|  834|Drosophila melanogaster RE07883p pro...    28   3.6  
AE013599-2535|AAF57814.1|  858|Drosophila melanogaster CG4966-PA...    28   3.6  
AE013599-2533|AAG22260.1|  834|Drosophila melanogaster CG4966-PB...    28   3.6  
AY122177-1|AAM52689.1|  946|Drosophila melanogaster LD35811p pro...    28   4.8  
AE014134-3034|AAN11025.1|  946|Drosophila melanogaster CG10702-P...    28   4.8  
AE014134-3033|AAN11024.1|  946|Drosophila melanogaster CG10702-P...    28   4.8  
AE014134-3032|AAF53753.1|  946|Drosophila melanogaster CG10702-P...    28   4.8  
AY118582-1|AAM49951.1|  830|Drosophila melanogaster LD44094p pro...    27   8.4  
AE014296-3602|AAN12187.1|  830|Drosophila melanogaster CG11248-P...    27   8.4  
AE014296-3601|AAF51765.1|  830|Drosophila melanogaster CG11248-P...    27   8.4  

>AY118362-1|AAM48391.1|  834|Drosophila melanogaster RE07883p
           protein.
          Length = 834

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 72  ARQPGKTQPDSFGREQLGQCGQQ 140
           A+ PG  QPD   R +L  CGQQ
Sbjct: 657 AQPPGPIQPDGLQRTELYICGQQ 679


>AE013599-2535|AAF57814.1|  858|Drosophila melanogaster CG4966-PA,
           isoform A protein.
          Length = 858

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 72  ARQPGKTQPDSFGREQLGQCGQQ 140
           A+ PG  QPD   R +L  CGQQ
Sbjct: 681 AQPPGPIQPDGLQRTELYICGQQ 703


>AE013599-2533|AAG22260.1|  834|Drosophila melanogaster CG4966-PB,
           isoform B protein.
          Length = 834

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 72  ARQPGKTQPDSFGREQLGQCGQQ 140
           A+ PG  QPD   R +L  CGQQ
Sbjct: 657 AQPPGPIQPDGLQRTELYICGQQ 679


>AY122177-1|AAM52689.1|  946|Drosophila melanogaster LD35811p
           protein.
          Length = 946

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 205 HHRCPPHR*ALLKHRAYLSGSSCWPHCPS 119
           + RC      +LKH   +SGS C   CPS
Sbjct: 255 YQRCYTKAECVLKHGYVISGSQCVAFCPS 283


>AE014134-3034|AAN11025.1|  946|Drosophila melanogaster CG10702-PC,
           isoform C protein.
          Length = 946

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 205 HHRCPPHR*ALLKHRAYLSGSSCWPHCPS 119
           + RC      +LKH   +SGS C   CPS
Sbjct: 255 YQRCYTKAECVLKHGYVISGSQCVAFCPS 283


>AE014134-3033|AAN11024.1|  946|Drosophila melanogaster CG10702-PB,
           isoform B protein.
          Length = 946

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 205 HHRCPPHR*ALLKHRAYLSGSSCWPHCPS 119
           + RC      +LKH   +SGS C   CPS
Sbjct: 255 YQRCYTKAECVLKHGYVISGSQCVAFCPS 283


>AE014134-3032|AAF53753.1|  946|Drosophila melanogaster CG10702-PA,
           isoform A protein.
          Length = 946

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 205 HHRCPPHR*ALLKHRAYLSGSSCWPHCPS 119
           + RC      +LKH   +SGS C   CPS
Sbjct: 255 YQRCYTKAECVLKHGYVISGSQCVAFCPS 283


>AY118582-1|AAM49951.1|  830|Drosophila melanogaster LD44094p
           protein.
          Length = 830

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +1

Query: 46  ELVDAITEQPDSQERLSRIVLAGNSLGNAANKKSLKDKLGASAELS 183
           +L + I+      + LSRI++AG          SL D+L A AE S
Sbjct: 785 QLGEGISACQSDMKELSRIIIAGRERRRVEPMPSLMDELRAVAEHS 830


>AE014296-3602|AAN12187.1|  830|Drosophila melanogaster CG11248-PB,
           isoform B protein.
          Length = 830

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +1

Query: 46  ELVDAITEQPDSQERLSRIVLAGNSLGNAANKKSLKDKLGASAELS 183
           +L + I+      + LSRI++AG          SL D+L A AE S
Sbjct: 785 QLGEGISACQSDMKELSRIIIAGRERRRVEPMPSLMDELRAVAEHS 830


>AE014296-3601|AAF51765.1|  830|Drosophila melanogaster CG11248-PA,
           isoform A protein.
          Length = 830

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +1

Query: 46  ELVDAITEQPDSQERLSRIVLAGNSLGNAANKKSLKDKLGASAELS 183
           +L + I+      + LSRI++AG          SL D+L A AE S
Sbjct: 785 QLGEGISACQSDMKELSRIIIAGRERRRVEPMPSLMDELRAVAEHS 830


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,525,093
Number of Sequences: 53049
Number of extensions: 191422
Number of successful extensions: 507
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)