Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0650
         (375 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   7.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   7.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   9.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   9.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 118 LLRSTFICLTTGLNILNQIRILAP 189
           +LRS F  L   +  LNQ   L P
Sbjct: 187 MLRSRFAILNKQIRFLNQYLRLKP 210


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 118 LLRSTFICLTTGLNILNQIRILAP 189
           +LRS F  L   +  LNQ   L P
Sbjct: 205 MLRSRFAILNKQIRFLNQYLRLKP 228


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +3

Query: 264 LDHECXNNLVHRYXRTYXLR 323
           + H C + +++RY  T  +R
Sbjct: 82  VSHGCVSKILNRYQETGSIR 101


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 132 LYLSNYRLEYSKSNTYFS 185
           LY  NY  + S+ N Y S
Sbjct: 122 LYTINYNFKESERNDYVS 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,589
Number of Sequences: 336
Number of extensions: 961
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)