Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0649
         (432 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   5.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    20   8.8  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   8.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   8.8  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 228 QISS*RQTFASAGFDRQILIWNVYGQCENVMV 323
           QI + +Q+ A+A   R   +W+ Y    NV+V
Sbjct: 80  QIIANKQSGAAAPDARTQRVWSQYNFTNNVLV 111


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 188 LCCWKDTK 211
           L CW+DTK
Sbjct: 375 LTCWQDTK 382


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 7/21 (33%), Positives = 9/21 (42%)
 Frame = +2

Query: 146 LLHLFHEHQTCMRQLCCWKDT 208
           L  +F    +C R   CW  T
Sbjct: 102 LYGIFGHETSCTRYWTCWNGT 122


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 66  FSFSFYIWHFLRCLFTYLFLVP 1
           ++F  +  H L  L  Y F+VP
Sbjct: 118 YAFIIFTVHLLFLLCIYYFVVP 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,195
Number of Sequences: 336
Number of extensions: 2552
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)