Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0649
(432 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 69 1e-12
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 54 4e-08
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 53 1e-07
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 52 1e-07
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 51 3e-07
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 50 5e-07
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 48 2e-06
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 48 3e-06
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 48 3e-06
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 47 5e-06
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 47 5e-06
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 47 6e-06
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 47 6e-06
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 46 1e-05
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 46 1e-05
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 46 1e-05
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 45 3e-05
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 45 3e-05
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 44 4e-05
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 44 4e-05
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 44 4e-05
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 44 6e-05
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 43 8e-05
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 43 8e-05
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 43 8e-05
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 43 1e-04
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 42 1e-04
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 42 2e-04
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 42 2e-04
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 42 2e-04
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 42 2e-04
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 41 3e-04
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 41 3e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 41 4e-04
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 41 4e-04
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 41 4e-04
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 41 4e-04
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 41 4e-04
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 41 4e-04
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 41 4e-04
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 41 4e-04
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 40 5e-04
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 40 5e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 40 5e-04
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 40 5e-04
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 40 7e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 40 7e-04
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 40 7e-04
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 40 7e-04
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 40 7e-04
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 40 7e-04
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 40 7e-04
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 40 0.001
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 40 0.001
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 40 0.001
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 40 0.001
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 40 0.001
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 40 0.001
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 39 0.001
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 39 0.001
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 39 0.001
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 39 0.002
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 39 0.002
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 39 0.002
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 39 0.002
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 39 0.002
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 39 0.002
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 39 0.002
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 39 0.002
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 39 0.002
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 38 0.002
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 38 0.004
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 37 0.005
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 37 0.005
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 37 0.005
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 37 0.005
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 37 0.007
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 37 0.007
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 37 0.007
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 37 0.007
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 37 0.007
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 36 0.009
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 36 0.009
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 36 0.009
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 36 0.009
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 36 0.009
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 36 0.012
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 36 0.016
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 36 0.016
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 36 0.016
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 36 0.016
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 35 0.021
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 35 0.021
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 35 0.027
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 34 0.036
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 34 0.036
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 34 0.036
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 34 0.036
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 34 0.036
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 34 0.036
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 34 0.036
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 34 0.048
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 34 0.048
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 34 0.048
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 34 0.048
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 33 0.063
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 33 0.063
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 33 0.063
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 33 0.063
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 33 0.063
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 33 0.083
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 33 0.083
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 33 0.083
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 33 0.083
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 33 0.083
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 33 0.083
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 33 0.083
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 33 0.11
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 33 0.11
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 32 0.15
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 32 0.15
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 32 0.15
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 32 0.15
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 32 0.15
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 32 0.15
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 32 0.19
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 32 0.19
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 32 0.19
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 32 0.19
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 32 0.19
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 31 0.25
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 31 0.25
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 31 0.25
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 31 0.34
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 31 0.44
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 31 0.44
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 31 0.44
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 30 0.59
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 30 0.59
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 30 0.59
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 30 0.59
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 30 0.59
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 30 0.59
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 30 0.59
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 30 0.78
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 30 0.78
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 30 0.78
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 30 0.78
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 30 0.78
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 30 0.78
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 30 0.78
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 29 1.0
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 29 1.0
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 29 1.0
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 29 1.0
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 29 1.4
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 29 1.4
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 29 1.4
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 29 1.4
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 29 1.4
At4g22730.1 68417.m03279 leucine-rich repeat transmembrane prote... 29 1.4
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 29 1.4
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 29 1.4
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 29 1.4
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 29 1.4
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 29 1.4
At1g03380.1 68414.m00317 expressed protein 29 1.4
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 29 1.8
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 29 1.8
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 29 1.8
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 29 1.8
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 29 1.8
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 28 2.4
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 28 2.4
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 28 2.4
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 28 2.4
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 28 2.4
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 28 2.4
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 28 2.4
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 28 2.4
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 28 2.4
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 28 3.1
At4g27620.2 68417.m03970 expressed protein 28 3.1
At4g27620.1 68417.m03969 expressed protein 28 3.1
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 28 3.1
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 27 4.1
At5g09820.1 68418.m01136 plastid-lipid associated protein PAP / ... 27 4.1
At5g04800.2 68418.m00499 40S ribosomal protein S17 (RPS17D) 40S ... 27 4.1
At5g04800.1 68418.m00498 40S ribosomal protein S17 (RPS17D) 40S ... 27 4.1
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 27 4.1
At3g44770.1 68416.m04820 hypothetical protein contains Pfam prof... 27 4.1
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 27 4.1
At3g10610.1 68416.m01276 40S ribosomal protein S17 (RPS17C) simi... 27 4.1
At2g43500.1 68415.m05405 RWP-RK domain-containing protein low si... 27 4.1
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 27 4.1
At2g05220.1 68415.m00550 40S ribosomal protein S17 (RPS17B) 27 4.1
At2g04390.1 68415.m00442 40S ribosomal protein S17 (RPS17A) 27 4.1
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 27 4.1
At3g58900.1 68416.m06564 F-box family protein contains F-box dom... 27 5.5
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 27 5.5
At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transfera... 27 5.5
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 27 5.5
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 27 5.5
At5g40520.1 68418.m04916 expressed protein 27 7.2
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 27 7.2
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 27 7.2
At1g69480.1 68414.m07983 EXS family protein / ERD1/XPR1/SYG1 fam... 27 7.2
At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repe... 27 7.2
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 26 9.6
At5g52800.1 68418.m06552 expressed protein ; expression supporte... 26 9.6
At3g19720.2 68416.m02498 dynamin family protein identical to cDN... 26 9.6
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 26 9.6
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 69.3 bits (162), Expect = 1e-12
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
AS DR+I +W V+G C+N MV+KGH AI+ L ++ DGS + + + D TV WDV T
Sbjct: 69 ASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVET 127
Score = 48.0 bits (109), Expect = 3e-06
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ G D + +W++ + E M ++GH I + SPDGS+L T DN + VWD+
Sbjct: 197 TGGVDNDVKVWDLR-KGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Score = 39.9 bits (89), Expect = 7e-04
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1
Query: 163 RTSNLYAPIMLLEGHQGEIFTGKFHPEG 246
RTS+L APIMLL GH ++T KF+P G
Sbjct: 38 RTSSLEAPIMLLSGHPSAVYTMKFNPAG 65
Score = 33.1 bits (72), Expect = 0.083
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Frame = +3
Query: 264 GFDRQILIWNV--YG-QCENVMVMKGHTGA----IMQLCFSPDGSHLYTGATDNTVAVWD 422
G D ++ +W++ Y Q V + +GH +++ +SPDG+ + G++D V +WD
Sbjct: 241 GMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWD 300
Score = 32.3 bits (70), Expect = 0.15
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +3
Query: 315 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+M++ GH A+ + F+P G+ + +G+ D + +W V
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRV 82
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 345 IMQLCFSPDGSHLYTGATDNTVAVWDV 425
I + FS ++TG DN V VWD+
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDL 209
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/52 (21%), Positives = 27/52 (51%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
DR + IW+ + + + GHTG++ + F P + + ++D + + ++
Sbjct: 293 DRMVHIWDTTSR-RTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 190 MLLEGHQGEIFTGKFHPEGKHLLLQALTDK 279
M LEGHQ I P+G +LL + +K
Sbjct: 216 MTLEGHQDTITGMSLSPDGSYLLTNGMDNK 245
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 54.0 bits (124), Expect = 4e-08
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +3
Query: 246 QTF-ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
QTF AS+GFD +W++ N+++ +GH ++ + FSP+G HL +G DN +WD
Sbjct: 142 QTFKASSGFDSLARVWDLR-TARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWD 200
Query: 423 V 425
+
Sbjct: 201 L 201
Score = 32.3 bits (70), Expect = 0.15
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 285 IWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVW 419
+W V ++V+KGH + + FS D L T +TD T +W
Sbjct: 89 LWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIW 134
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
SAG D ++ IW+VY + + GH A+ +CFS DGS T D + WD T
Sbjct: 300 SAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTET 357
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 243 RQTFASAGF-DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
+Q AG D++I+ W++ E H GA+ + F + T + D ++ VW
Sbjct: 381 KQNILLAGMSDKKIVQWDI-NTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 439
Query: 420 D 422
+
Sbjct: 440 E 440
Score = 27.9 bits (59), Expect = 3.1
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYG--QCENVMVMKGH--TGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
A+ D QILI++ Q GH G Q+ FSPDG + +G + WD
Sbjct: 471 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 530
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 52.4 bits (120), Expect = 1e-07
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = +3
Query: 210 RRNFHRQISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYT 389
R + +SS + A+ G DR + IW+V + E+V GH + LCF S LY+
Sbjct: 223 RESLALAVSSDGRYLATGGVDRHVHIWDVRTR-EHVQAFPGHRNTVSCLCFRYGTSELYS 281
Query: 390 GATDNTVAVWDV 425
G+ D TV VW+V
Sbjct: 282 GSFDRTVKVWNV 293
Score = 34.3 bits (75), Expect = 0.036
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 327 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
K H+ + L S DG +L TG D V +WDV T
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRT 253
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 51.2 bits (117), Expect = 3e-07
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
ASA FD+ + +WN + GQ V V +GH G + Q+ +S D L +G+ D+T+ +W++ T
Sbjct: 376 ASASFDKSVRLWNGITGQF--VTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRT 433
Score = 41.9 bits (94), Expect = 2e-04
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
AS D + +W++Y + + KGH ++ + +SPDG HL +G+ + W+
Sbjct: 125 ASGSGDTTVRLWDLYTETP-LFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWN 179
Score = 40.3 bits (90), Expect = 5e-04
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 330 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
GH A++ + FSPDG L +G+ D TV +WD+ T
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYT 140
Score = 35.1 bits (77), Expect = 0.021
Identities = 18/64 (28%), Positives = 38/64 (59%)
Frame = +3
Query: 231 ISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 410
+SS + F ++ D IW++ + ++++ + GHT A+ + + DG +YTG+ D T+
Sbjct: 207 LSSPCRRFVTSSKDGDARIWDITLK-KSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTI 264
Query: 411 AVWD 422
+W+
Sbjct: 265 KMWE 268
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+ S D + +W + + GH + + FSPDG + + + D +V +W+
Sbjct: 330 ERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
S D + IW + + + + GH + + +SPDG + +G D + +W
Sbjct: 419 SGSKDSTLKIWEIRTK-KLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 184 PIMLLEGHQGEIFTGKFHPEGKHLL 258
P+ +GH+ + T + P+GKHL+
Sbjct: 143 PLFTCKGHKNWVLTVAWSPDGKHLV 167
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 50.4 bits (115), Expect = 5e-07
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
T SA +D+ + +WN+ C+ + GHTG + + SPDGS +G D V +WD+
Sbjct: 166 TIVSASWDKTVKVWNL-SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 223
Score = 34.3 bits (75), Expect = 0.036
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVM--KGHTGAIMQLCFSPDGSH--LYTGATDNTVAVWDV 425
SA DR I +WN G+C+ + +GH + + FSP+ + + + D TV VW++
Sbjct: 122 SASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 181
Score = 32.7 bits (71), Expect = 0.11
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +3
Query: 231 ISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 410
+SS Q S +D ++ +W++ + GHT ++ + FS D + + + D T+
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTI 129
Query: 411 AVWD 422
+W+
Sbjct: 130 KLWN 133
Score = 30.3 bits (65), Expect = 0.59
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +3
Query: 258 SAGFDRQILIWNV------YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
SA D+ I++W + YG + + GH+ + + S DG +G+ D + +W
Sbjct: 33 SASRDKSIILWKLTKDDKAYGVAQRRLT--GHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 420 DV 425
D+
Sbjct: 91 DL 92
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 354 LCFSPDGSHLYTGATDNTVAVWDV 425
L +S DGS L++G TD + VW +
Sbjct: 301 LNWSADGSTLFSGYTDGVIRVWGI 324
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 48.4 bits (110), Expect = 2e-06
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
A+ D+ + +W+V G+C + + GH ++ L SPDG ++ +G D T+ +WD+ T
Sbjct: 515 ATGSSDKTVRLWDVQTGECVRIFI--GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST 572
Score = 40.7 bits (91), Expect = 4e-04
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
FAS DR IW++ + + + +M GH + + + P+ +++ TG++D TV +WDV T
Sbjct: 475 FASCSHDRTARIWSM-DRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQT 530
Score = 39.9 bits (89), Expect = 7e-04
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
AS D I++W++ + + GH + L +S +GS L +G+ D TV +WDV
Sbjct: 557 ASGDEDGTIMMWDL-STARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 612
Score = 31.9 bits (69), Expect = 0.19
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 321 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
++ GH+G + FSP G + + + D T+ +W
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLW 445
Score = 30.7 bits (66), Expect = 0.44
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
S+ D I +W+ N++ KGH + FSP G + + + D T +W +
Sbjct: 435 SSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSM 489
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 48.0 bits (109), Expect = 3e-06
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSH--LYTGATDNTVAVWDV 425
A+AG DR++L+W+V G C + +GH G + + F PD + L +G+ D TV VWD+
Sbjct: 118 ATAGADRKVLVWDVDGGFCTH--YFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDL 175
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
SAG RQI +W++ + + KGH G +M + G L T D V VWDV
Sbjct: 77 SAGHSRQIRVWDLE-TLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDV 131
Score = 40.3 bits (90), Expect = 5e-04
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 210 RRNFHRQISS*RQTFASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLY 386
RR F + S+ Q +A D+ + IW + G C + +GHT ++++ F DG+
Sbjct: 542 RRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSC--LKTFEGHTSSVLRASFITDGTQFV 599
Query: 387 TGATDNTVAVWDVPT 431
+ D + +W+V T
Sbjct: 600 SCGADGLLKLWNVNT 614
Score = 30.7 bits (66), Expect = 0.44
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
DR IW + +V+ +KGH I + FS + T + D TV +W +
Sbjct: 520 DRTASIWRL-PDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAI 570
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENV---------MVMKGHTGAIMQLCFSPDGSHLYTGATDN 404
F S DR + +W++ G E+ V+ H I + + + S + TG+ D
Sbjct: 462 FVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDR 521
Query: 405 TVAVWDVP 428
T ++W +P
Sbjct: 522 TASIWRLP 529
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
++G + + L SPD L++ + VWD+ T
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLET 91
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
FAS D + IW++ + C + KGHT + L F+PDG + +G DN V VWD+
Sbjct: 209 FASGSLDTNLKIWDIRKKGC--IHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL 265
Score = 37.5 bits (83), Expect = 0.004
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
S G D + +W++ + + K H G I L F P L TG+ D TV WD+ T
Sbjct: 253 SGGEDNVVKVWDLTAG-KLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLET 309
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/60 (21%), Positives = 29/60 (48%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ + G D ++ +W + G+ ++ + GH+ I + F + GA T+ +WD+
Sbjct: 123 RVLVTGGEDHKVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDL 181
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +3
Query: 279 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
I +W++ + + V + GH + + F P G +G+ D + +WD+
Sbjct: 176 IKLWDLE-EAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDI 223
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 47.2 bits (107), Expect = 5e-06
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
FAS D + IW++ + C + KGHT + L F+PDG + +G DN V VWD+
Sbjct: 116 FASGSLDTNLKIWDIRKKGC--IHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
Score = 37.5 bits (83), Expect = 0.004
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
S G D + +W++ + + K H G I L F P L TG+ D TV WD+ T
Sbjct: 160 SGGEDNIVKVWDLTAG-KLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLET 216
Score = 31.9 bits (69), Expect = 0.19
Identities = 13/60 (21%), Positives = 29/60 (48%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ + G D ++ +W + G+ ++ + GH+ I + F + GA T+ +WD+
Sbjct: 30 RVLVTGGEDHKVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDL 88
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +3
Query: 279 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
I +W++ + + V + GH + + F P G +G+ D + +WD+
Sbjct: 83 IKLWDLE-EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 47.2 bits (107), Expect = 5e-06
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
FAS D + IW++ + C + KGHT + L F+PDG + +G DN V VWD+
Sbjct: 116 FASGSLDTNLKIWDIRKKGC--IHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
Score = 37.5 bits (83), Expect = 0.004
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
S G D + +W++ + + K H G I L F P L TG+ D TV WD+ T
Sbjct: 160 SGGEDNIVKVWDLTAG-KLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLET 216
Score = 31.9 bits (69), Expect = 0.19
Identities = 13/60 (21%), Positives = 29/60 (48%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ + G D ++ +W + G+ ++ + GH+ I + F + GA T+ +WD+
Sbjct: 30 RVLVTGGEDHKVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDL 88
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +3
Query: 279 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
I +W++ + + V + GH + + F P G +G+ D + +WD+
Sbjct: 83 IKLWDLE-EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 46.8 bits (106), Expect = 6e-06
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +3
Query: 213 RNFHRQISS*RQTFASAGFDRQILIWNVYGQCEN-------VMVMKGHTGAIMQLCFSPD 371
+N +S + A+A F + +W + Q + VM +KGH A+ LCFSP+
Sbjct: 241 KNHMAAVSPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPN 300
Query: 372 GSHLYTGATDNTVAVWDV 425
+ T + D ++ VW++
Sbjct: 301 SEQIITASKDGSIRVWNI 318
Score = 34.3 bits (75), Expect = 0.036
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
+KGH A+ LCFS DG L T D + V+
Sbjct: 82 LKGHGDAVTGLCFSSDGKSLATACADGVIRVF 113
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 46.8 bits (106), Expect = 6e-06
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
T SA +D+ + +WN+ C+ + GH+G + + SPDGS +G D + +WD+
Sbjct: 165 TIVSASWDKTVKVWNLQN-CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 222
Score = 35.5 bits (78), Expect = 0.016
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +3
Query: 231 ISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 410
+SS Q S +D ++ +W++ E+ GHT ++ + FS D + + + D T+
Sbjct: 71 LSSDGQFALSGSWDGELRLWDL-ATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Query: 411 AVWD 422
+W+
Sbjct: 130 KLWN 133
Score = 35.5 bits (78), Expect = 0.016
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 234 SS*RQTFASAGFDRQILIWNVYGQCE-NVMVMKGHTGAIMQLCFSPDG--SHLYTGATDN 404
S+ + SA DR I +WN G+C+ + GH + + FSP+ + + + D
Sbjct: 114 STDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 405 TVAVWDV 425
TV VW++
Sbjct: 174 TVKVWNL 180
Score = 35.5 bits (78), Expect = 0.016
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQ-LCFSPDGSHLYTGATDNTVAVWDV 425
AS G D IL+W++ E + G+I+ LCFSP+ L AT+N++ +WD+
Sbjct: 209 ASGGKDGVILLWDL---AEGKKLYSLEAGSIIHSLCFSPNRYWL-CAATENSIRIWDL 262
Score = 33.1 bits (72), Expect = 0.083
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMV----MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
D+ I++W + + ++ V M GH+ + + S DG +G+ D + +WD+ T
Sbjct: 37 DKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAT 94
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 354 LCFSPDGSHLYTGATDNTVAVWDV 425
L +S DG+ L++G TD + VW +
Sbjct: 300 LNWSADGNTLFSGYTDGVIRVWGI 323
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 45.6 bits (103), Expect = 1e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 276 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
QI++W Y + + GHT ++ L SPDG + TGA D T+ W+V
Sbjct: 446 QIIVWK-YPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 33.1 bits (72), Expect = 0.083
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+S D+ IL ++ Q ++V + GH + L +S D L +G DN + VW+
Sbjct: 308 SSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWN 363
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/59 (20%), Positives = 24/59 (40%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
Q + G + +WN + G ++ + ++ G+HL G + V +WD
Sbjct: 222 QNVLAVGLGNCVYLWNACSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWD 280
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 45.6 bits (103), Expect = 1e-05
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
T SA +D+ + +WN+ C+ + GH+G + + SPDGS +G D + +WD+
Sbjct: 165 TIVSASWDKTVKVWNLQN-CKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 222
Score = 35.5 bits (78), Expect = 0.016
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQ-LCFSPDGSHLYTGATDNTVAVWDV 425
AS G D IL+W++ E + G+I+ LCFSP+ L AT+N++ +WD+
Sbjct: 209 ASGGKDGVILLWDL---AEGKKLYSLEAGSIIHSLCFSPNRYWL-CAATENSIRIWDL 262
Score = 35.1 bits (77), Expect = 0.021
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +3
Query: 231 ISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 410
+SS Q S +D ++ +W++ E GHT ++ + FS D + + + D T+
Sbjct: 71 LSSDGQFALSGSWDGELRLWDL-ATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Query: 411 AVWD 422
+W+
Sbjct: 130 KLWN 133
Score = 34.7 bits (76), Expect = 0.027
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 234 SS*RQTFASAGFDRQILIWNVYGQCE-NVMVMKGHTGAIMQLCFSPDG--SHLYTGATDN 404
S+ + SA DR I +WN G+C+ + GH + + FSP+ + + + D
Sbjct: 114 STDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 405 TVAVWDV 425
TV VW++
Sbjct: 174 TVKVWNL 180
Score = 31.1 bits (67), Expect = 0.34
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMV----MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+A D+ I++W + ++ V + GH+ + + S DG +G+ D + +WD+
Sbjct: 33 TASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL 92
Query: 426 PT 431
T
Sbjct: 93 AT 94
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 354 LCFSPDGSHLYTGATDNTVAVWDV 425
L +S DGS L++G TD V VW +
Sbjct: 300 LNWSADGSTLFSGYTDGVVRVWGI 323
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 45.6 bits (103), Expect = 1e-05
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
AS G D +W++ +++V +GH + + FSP+G HL +G DN +WD+
Sbjct: 397 ASCGLDSLARVWDLRTG-RSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDL 452
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
A+A DR +W G + +GH + ++ F P G +L T + D T +WD+ T
Sbjct: 314 ATASADRTAKLWKTDGTL--LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINT 370
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/58 (22%), Positives = 31/58 (53%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
+ +D+ +W++ E +++ +GH+ ++ + F DG+ + D+ VWD+ T
Sbjct: 356 TTSYDKTWRLWDINTGAE-LLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRT 412
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +3
Query: 285 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
+W + + V+K H + FSP L T + D T +W
Sbjct: 281 LWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLW 325
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +1
Query: 52 ETKRKAEDVSLVPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAP----IMLLEGHQGEI 219
E + ++++ + R V + + T+S RT+ L+ + EGH +
Sbjct: 283 EMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRL 342
Query: 220 FTGKFHPEGKHL 255
FHP GK+L
Sbjct: 343 ARVAFHPSGKYL 354
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +3
Query: 315 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
VM ++GHT ++ L +SPD S L +G+ DNTV +W++ T
Sbjct: 111 VMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRT 149
Score = 37.9 bits (84), Expect = 0.003
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
AS D + IWN+ G C V+ +GH + + + P GS + + + D TV +W
Sbjct: 134 ASGSLDNTVHIWNMRTGMCTTVL--RGHLSLVKGVTWDPIGSFIASQSDDKTVIIW 187
Score = 33.1 bits (72), Expect = 0.083
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTG-AIMQLCFSPDGSHLYTGATDNTVAV 416
DR I +W G + V K G +++ L +SPDG L+ + D TVA+
Sbjct: 306 DRTITVWTT-GSARPLFVAKHFFGQSVVDLSWSPDGYSLFACSLDGTVAM 354
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
AS D + +W+ + C + KGHT I + FSPDG + +G DN V VWD+
Sbjct: 65 ASGSSDTNLRVWDTRKKGC--IQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL 120
Score = 35.9 bits (79), Expect = 0.012
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
S G D + +W++ + + K H G I L F P L TG+ D TV WD+ T
Sbjct: 108 SGGLDNVVKVWDLTAG-KLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLET 164
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 279 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
I +W++ + + V GH + F P G L +G++D + VWD
Sbjct: 31 IKLWDLE-ESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWD 77
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 44.0 bits (99), Expect = 4e-05
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
SA +DR I +W+++ G C N ++ + AI C S DG +++G D + +WD+ T
Sbjct: 333 SAAYDRTIKLWDLHKGYCTNTVLFTSNCNAI---CLSIDGLTVFSGHMDGNLRLWDIQT 388
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 428
T S D + +W++ + + + GH+ A+ + S +G+ + T DN V+D
Sbjct: 371 TVFSGHMDGNLRLWDIQTG-KLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTR 429
Query: 429 T 431
T
Sbjct: 430 T 430
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 357 CFSPDGSHLYTGATDNTVAVWDV 425
C SPD ++ G+ D +V VW +
Sbjct: 452 CISPDDDYVAAGSADGSVHVWSL 474
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
H G + F + L+TG D V +WD
Sbjct: 230 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWD 259
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 44.0 bits (99), Expect = 4e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 276 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
QI++W Y V + GH+ ++ L SPDG + TGA D T+ W+V
Sbjct: 409 QIMLWK-YPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 34.3 bits (75), Expect = 0.036
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+S DR IL ++ Q + V + GH + L +S D L +G DN + VW+
Sbjct: 271 SSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWN 326
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
AS D + IW++ + C + KGH+ I + F+PDG + +G DN V VWD+
Sbjct: 116 ASGSSDANLKIWDIRKKGC--IQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDL 171
Score = 35.9 bits (79), Expect = 0.012
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
F + G D ++ +W + G+ ++M + GHT A+ + F + GA+ + +WDV
Sbjct: 31 FITGGDDYKVNLWAI-GKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDV 87
Score = 35.9 bits (79), Expect = 0.012
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
S G D + +W++ + + K H G I L F P L TG+ D TV WD+ T
Sbjct: 159 SGGLDNVVKVWDLTAG-KLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLET 215
Score = 31.1 bits (67), Expect = 0.34
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 279 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
I +W+V + + V GH + F P G L +G++D + +WD+
Sbjct: 82 IKLWDVE-EAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDI 129
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 43.6 bits (98), Expect = 6e-05
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
SA D + IW+ E + V++GHT + + F+P + + +G+ D T+ +W+V T
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKT 159
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
S FD I IW V G+C V ++K H+ I + F+ DGS + + + D + +WD
Sbjct: 145 SGSFDETIRIWEVKTGKC--VRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWD 198
Score = 34.3 bits (75), Expect = 0.036
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 294 VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
+Y ++ ++GHT AI + FS DG+ L + + D T+ +W
Sbjct: 29 IYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILW 70
Score = 34.3 bits (75), Expect = 0.036
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
ASA D+ +++W+ + +GH+ I L +S D + + + D T+ +WD
Sbjct: 59 ASASVDKTMILWSATNY-SLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWD 113
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 43.2 bits (97), Expect = 8e-05
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 428
SA D I +W++ + V GH GA+ L S DG+ L + TD TV +W+VP
Sbjct: 74 SASMDGDIRLWDISSR-RTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNVP 129
Score = 31.9 bits (69), Expect = 0.19
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 321 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
V K H A+M + FSP G TG+ D +V ++
Sbjct: 274 VHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIF 306
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 43.2 bits (97), Expect = 8e-05
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 276 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
QI++W Y + + GH+ ++ L SPDG + TGA D T+ W+V
Sbjct: 403 QIIVWK-YPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 37.1 bits (82), Expect = 0.005
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+S D+ IL ++ Q ++V +KGH I L +S D L +G DN + VW+
Sbjct: 265 SSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWN 320
Score = 30.7 bits (66), Expect = 0.44
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
Q + G + +WN + G + + ++ G+HL G + TV +WDV
Sbjct: 179 QNVLAVGLGNCVYLWNACSSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDV 238
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 279 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
+ IW+V +C+N+ M+GH + L +S S L +G+ D ++ D+ T
Sbjct: 233 VQIWDVL-RCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDIRT 280
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 43.2 bits (97), Expect = 8e-05
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVY-GQCENVMVMK-GHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
QT S G D I IW+ G+ + GH AI LC + D SH TG+ D T +W
Sbjct: 188 QTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLW 247
Query: 420 DVPT 431
D+ T
Sbjct: 248 DMRT 251
Score = 37.5 bits (83), Expect = 0.004
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
E + +GH+GA+ S D S L TG+ D T +WDV
Sbjct: 70 ERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDV 108
Score = 32.3 bits (70), Expect = 0.15
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 410
E + +KGH G I L FSPDG +G D V
Sbjct: 308 EEIGGVKGHFGPINALAFSPDGKSFSSGGEDGYV 341
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 318 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
++MKGH + L ++ +G L++ A D+T VW
Sbjct: 31 ILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVW 64
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
A+ D Q IW + G E + + H G I L ++ G +L TG+ D T VWDV
Sbjct: 340 ATGSCDGQARIWTLNG--ELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDV 394
Score = 42.3 bits (95), Expect = 1e-04
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
T ASA FD + +W+ + + GH + L FSP+G ++ +G+ D ++ +W +
Sbjct: 513 TLASASFDSTVKLWDAE-LGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSI 570
Score = 36.7 bits (81), Expect = 0.007
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 312 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 428
+V +++GHT + +SP S L +G+ D T +W +P
Sbjct: 257 DVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIP 295
Score = 32.7 bits (71), Expect = 0.11
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+FA++ D I + + G+ GH G + + + P GS L + + D+T +W++
Sbjct: 420 SFATSSTDSMIYLCKI-GETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNI 477
Score = 31.5 bits (68), Expect = 0.25
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
AS D+ I IW++ + + V G+ G I ++C++ +G+ + DN+V V D
Sbjct: 557 ASGSLDKSIHIWSIK-EGKIVKTYTGN-GGIFEVCWNKEGNKIAACFADNSVCVLD 610
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 428
A+A D+ + IWNV G + V+ GH + FS DG L T ++D T +W +P
Sbjct: 227 ATASSDKTVKIWNVDG-FKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMP 283
Score = 36.7 bits (81), Expect = 0.007
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 315 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
VM HT +M + F D +Y+G+ D TV +WD+
Sbjct: 71 VMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDL 107
Score = 33.5 bits (73), Expect = 0.063
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
++ H G I++ SP +L T ++D TV +W+V
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIWNV 240
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVY-GQCENVMVMK-GHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
QT S G D+ I IW+ G+ + GH I LC + D SH TG+ D T +W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 420 DVPT 431
D+ T
Sbjct: 221 DMRT 224
Score = 36.7 bits (81), Expect = 0.007
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
E + +GH GA+ S D S L TG+ D T +WDV
Sbjct: 43 ERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDV 81
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 318 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
++MKGH + L ++ +G L++ A D+T +W
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLW 37
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVY-GQCENVMVMK-GHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
QT S G D+ I IW+ G+ + GH I LC + D SH TG+ D T +W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 420 DVPT 431
D+ T
Sbjct: 221 DMRT 224
Score = 36.7 bits (81), Expect = 0.007
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
E + +GH GA+ S D S L TG+ D T +WDV
Sbjct: 43 ERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDV 81
Score = 31.1 bits (67), Expect = 0.34
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 410
E + +KGH G I L F+PDG +G D V
Sbjct: 281 EEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYV 314
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 318 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
++MKGH + L ++ +G L++ A D+T +W
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLW 37
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVY-GQCENVMVMK-GHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
QT S G D+ I IW+ G+ + GH I LC + D SH TG+ D T +W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 420 DVPT 431
D+ T
Sbjct: 221 DMRT 224
Score = 36.7 bits (81), Expect = 0.007
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
E + +GH GA+ S D S L TG+ D T +WDV
Sbjct: 43 ERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDV 81
Score = 31.1 bits (67), Expect = 0.34
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 410
E + +KGH G I L F+PDG +G D V
Sbjct: 281 EEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYV 314
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 318 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
++MKGH + L ++ +G L++ A D+T +W
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLW 37
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 41.5 bits (93), Expect = 2e-04
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
+N V++GH G + + F P TG+ D T+ +WDV T
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVAT 201
Score = 35.1 bits (77), Expect = 0.021
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 243 RQTFA-SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
R T+ SAG D+Q+ W++ Q + + GH + L P + TG D+ VW
Sbjct: 223 RHTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVW 281
Query: 420 DVPT 431
D+ T
Sbjct: 282 DIRT 285
Score = 32.7 bits (71), Expect = 0.11
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
F + DR I IW+V + + GH G + L S +++++ D V WD+
Sbjct: 185 FCTGSADRTIKIWDVATGVLK-LTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDL 241
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ G D +W++ + + + V+ H + + P + TG+ D+T+ WD+
Sbjct: 271 TGGRDSVCRVWDIRTKMQ-IFVLP-HDSDVFSVLARPTDPQVITGSHDSTIKFWDL 324
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 41.1 bits (92), Expect = 3e-04
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
+N V++GH G + + F P TG+ D T+ +WDV T
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVAT 207
Score = 37.1 bits (82), Expect = 0.005
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 243 RQTFA-SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
R T+ SAG D+Q+ W++ Q + + GH + L P L TG D+ VW
Sbjct: 229 RHTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVW 287
Query: 420 DVPT 431
D+ T
Sbjct: 288 DIRT 291
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/56 (21%), Positives = 26/56 (46%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ G D +W++ + + + + GH + + P + TG+ D T+ WD+
Sbjct: 277 TGGRDSVCRVWDIRTKMQ-IFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDL 331
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
F + DR I IW+V + + GH + L S +++++ D V WD+
Sbjct: 191 FCTGSADRTIKIWDVATGVLK-LTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDL 247
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 41.1 bits (92), Expect = 3e-04
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
Q A+A FD IW YG + E + ++GH + + ++ GS L T + D +V +W+
Sbjct: 87 QLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWE 146
Query: 423 V 425
V
Sbjct: 147 V 147
Score = 33.1 bits (72), Expect = 0.083
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 255 ASAGFDRQILIWNVY--GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
A+ D+ + IW V + + V+ GHT + + + P L++ + DNT+ VW
Sbjct: 134 ATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYG-----QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
AS D + IW C+ V+ + HT + +SP G L T + D T +W
Sbjct: 43 ASCSGDNTVRIWEQSSLSRSWTCKTVLE-ETHTRTVRSCAWSPSGQLLATASFDGTTGIW 101
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 40.7 bits (91), Expect = 4e-04
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +3
Query: 255 ASAGFDRQILIWNV--YGQCE-NVMVMKGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWD 422
AS D+ IWN+ +G + + +KGHT ++ QLC+ P S L T + D +V +WD
Sbjct: 36 ASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWD 95
Score = 33.9 bits (74), Expect = 0.048
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
A+A D+ + +W+ G+C + + G + + + PDG+H+ G D+ + + DV
Sbjct: 83 ATASGDKSVRLWDARSGKCTQQVELSGEN---INITYKPDGTHVAVGNRDDELTILDV 137
Score = 29.1 bits (62), Expect = 1.4
Identities = 10/43 (23%), Positives = 20/43 (46%)
Frame = +3
Query: 297 YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
Y + + + HT + P G + G+ D+ V++WD+
Sbjct: 178 YPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDI 220
Score = 27.9 bits (59), Expect = 3.1
Identities = 8/33 (24%), Positives = 20/33 (60%)
Frame = +3
Query: 327 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+GH + + ++ +G+ L +G+ D T +W++
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNI 49
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWD 422
TFASA DR I IWN+ G + + H + + + G +L TG+ D+T VWD
Sbjct: 157 TFASASLDRTIKIWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 423 VPT 431
T
Sbjct: 216 YQT 218
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
D +W+ Y V + GHT + +CF P+ + TG+ D TV +W T
Sbjct: 208 DHTAKVWD-YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Score = 34.3 bits (75), Expect = 0.036
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV 425
S+ D I +W+ + +GH+ +MQ+ F+P ++ + A+ D T+ +W++
Sbjct: 116 SSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWD 422
TFASA DR I IWN+ G + + H + + + G +L TG+ D+T VWD
Sbjct: 157 TFASASLDRTIKIWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 423 VPT 431
T
Sbjct: 216 YQT 218
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
D +W+ Y V + GHT + +CF P+ + TG+ D TV +W T
Sbjct: 208 DHTAKVWD-YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Score = 34.3 bits (75), Expect = 0.036
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV 425
S+ D I +W+ + +GH+ +MQ+ F+P ++ + A+ D T+ +W++
Sbjct: 116 SSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWD 422
TFASA DR I IWN+ G + + H + + + G +L TG+ D+T VWD
Sbjct: 157 TFASASLDRTIKIWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 423 VPT 431
T
Sbjct: 216 YQT 218
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
D +W+ Y V + GHT + +CF P+ + TG+ D TV +W T
Sbjct: 208 DHTAKVWD-YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Score = 34.3 bits (75), Expect = 0.036
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV 425
S+ D I +W+ + +GH+ +MQ+ F+P ++ + A+ D T+ +W++
Sbjct: 116 SSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 40.7 bits (91), Expect = 4e-04
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
TF++ D+ +W++ ++V V+KG+ GAI + ++ DG ++ + V V+DV
Sbjct: 333 TFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDV 391
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ GH + PDG TG D T VWD+
Sbjct: 315 LSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDI 348
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWD 422
TFASA DR I IWN+ G + + H + + + G +L TG+ D+T VWD
Sbjct: 157 TFASASLDRTIKIWNL-GSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 423 VPT 431
T
Sbjct: 216 YQT 218
Score = 34.7 bits (76), Expect = 0.027
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
D +W+ Y V ++GHT + + F P+ + TG+ D TV +W T
Sbjct: 208 DHTAKVWD-YQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATT 260
Score = 32.7 bits (71), Expect = 0.11
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV 425
S+ D I +W+ + +GH+ +MQ+ F+P ++ + A+ D T+ +W++
Sbjct: 116 SSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWD 422
TFASA DR I IWN+ G + + H + + + G +L TG+ D+T VWD
Sbjct: 157 TFASASLDRTIKIWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 423 VPT 431
T
Sbjct: 216 YQT 218
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
D +W+ Y V ++GHT + +CF P+ + TG+ D TV +W T
Sbjct: 208 DHTAKVWD-YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Score = 33.5 bits (73), Expect = 0.063
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV 425
S+ D I +W+ + +GH+ +MQ+ F+P ++ + A+ D T+ +W++
Sbjct: 116 SSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 40.7 bits (91), Expect = 4e-04
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 315 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
V + GH G I L FSPDG +L TG D V +W +
Sbjct: 191 VQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRI 227
Score = 31.1 bits (67), Expect = 0.34
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 187 IMLLEGHQGEIFTGKFHPEGKHL 255
+ + GH+G+I+T KF P+GK+L
Sbjct: 191 VQKINGHKGKIWTLKFSPDGKYL 213
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 40.3 bits (90), Expect = 5e-04
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +3
Query: 234 SS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVA 413
SS + ASAG D++ ++W + ++ HT I + FSP L T + D TV
Sbjct: 660 SSDGKMLASAGHDKKAVLWYT-DTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVR 718
Query: 414 VWD 422
VWD
Sbjct: 719 VWD 721
Score = 31.5 bits (68), Expect = 0.25
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDV 425
A++ FD+ + +W+ + ++ GH+ + L F P L DN + W +
Sbjct: 709 ATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSI 766
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
++GH I +C+ P G L +++ V VW + T
Sbjct: 814 LQGHANPINSVCWDPSGDFL-ASVSEDMVKVWTLGT 848
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 40.3 bits (90), Expect = 5e-04
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
AS D I++W+V G+ + ++GH + L F G L + + D + VWD+ T
Sbjct: 122 ASGSKDNDIILWDVVGE-SGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLET 179
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 231 ISS*RQTFASAGF-DRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDN 404
I+S + + G+ D I IW+ G CE + H GA+ L ++ GS L +G+ DN
Sbjct: 71 IASSASSLVAVGYADGSIRIWDTEKGTCE--VNFNSHKGAVTALRYNKVGSMLASGSKDN 128
Query: 405 TVAVWDV 425
+ +WDV
Sbjct: 129 DIILWDV 135
Score = 36.3 bits (80), Expect = 0.009
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
S G DR + W+ + E+++ ++GH I L S G L TG+ D ++ WD
Sbjct: 641 SIGKDRLVKYWDA-DKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 330 GHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
GH +M + S DG + TG+ D + +W
Sbjct: 580 GHKLPVMCIDISSDGELIVTGSQDKNLKIW 609
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 40.3 bits (90), Expect = 5e-04
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 231 ISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLY---TGATD 401
+SS ASA D I +W + + V++GHTGA+ + FSP + +Y + + D
Sbjct: 355 VSSNNALVASASNDFVIRVWRLPDGMP-ISVLRGHTGAVTAIAFSPRQASVYQLLSSSDD 413
Query: 402 NTVAVWD 422
T +WD
Sbjct: 414 GTCRIWD 420
Score = 34.3 bits (75), Expect = 0.036
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
+N+ ++GH A+ F G ++ TG+ D V +W + T
Sbjct: 296 QNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET 336
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 DRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 428
DR + IW++ C + +GH G I L S + + + + + D + VW +P
Sbjct: 326 DRLVKIWSMETALC--LASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLP 377
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 40.3 bits (90), Expect = 5e-04
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 270 DRQILIWNVYGQCEN-VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
D++I +WN + + V + H A+ L S DG LY+GA D ++ VW+
Sbjct: 255 DKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWE 306
Score = 35.5 bits (78), Expect = 0.016
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
SA +DR IW +C + + K H AI + S DG +YTG+ D + VW+
Sbjct: 209 SASWDRSFKIWRTSDFKCLD-SIEKAHDDAINAIVVSKDG-FVYTGSADKKIKVWN 262
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
H A+ L S DGS LY+ + D + +W
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIW 219
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 39.9 bits (89), Expect = 7e-04
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 243 RQTFASAGFDR-QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
R+ +S GF + Q+ +W Y + + GHT ++ + SPDG + + A D T+ +W
Sbjct: 324 RELLSSHGFTQNQLTLWK-YPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLW 382
Query: 420 DV 425
+V
Sbjct: 383 NV 384
Score = 33.9 bits (74), Expect = 0.048
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+ G D +I+ +V + V GHT + L +S G L +G DN V +WD
Sbjct: 192 TGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWD 246
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 39.9 bits (89), Expect = 7e-04
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
M GHT ++ + SPDG + TG++D TV +WD+
Sbjct: 239 MSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDL 272
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 39.9 bits (89), Expect = 7e-04
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
ASAG D+++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD
Sbjct: 524 ASAGHDKKVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWD 578
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/87 (21%), Positives = 41/87 (47%)
Frame = +3
Query: 165 NIKLVCANYVVGRTPRRNFHRQISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGA 344
+I C V G + + F + F +A + + I+++ + V + KGH+
Sbjct: 622 DINASCVRAVKGASTQVRFQPRTGQ----FLAAASENTVSIFDIENNNKRVNIFKGHSSN 677
Query: 345 IMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ +C+SP+G L +++ V +W +
Sbjct: 678 VHSVCWSPNG-ELVASVSEDAVKLWSL 703
Score = 34.3 bits (75), Expect = 0.036
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDV 425
A++ FD+ I IW+ + + GH +M + F P + L ++N + WD+
Sbjct: 566 ATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI 623
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.9 bits (89), Expect = 7e-04
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
ASAG D+++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD
Sbjct: 526 ASAGHDKKVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWD 580
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/87 (21%), Positives = 41/87 (47%)
Frame = +3
Query: 165 NIKLVCANYVVGRTPRRNFHRQISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGA 344
+I C V G + + F + F +A + + I+++ + V + KGH+
Sbjct: 624 DINASCVRAVKGASTQVRFQPRTGQ----FLAAASENTVSIFDIENNNKRVNIFKGHSSN 679
Query: 345 IMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ +C+SP+G L +++ V +W +
Sbjct: 680 VHSVCWSPNG-ELVASVSEDAVKLWSL 705
Score = 34.3 bits (75), Expect = 0.036
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDV 425
A++ FD+ I IW+ + + GH +M + F P + L ++N + WD+
Sbjct: 568 ATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI 625
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.9 bits (89), Expect = 7e-04
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
ASAG D+++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD
Sbjct: 526 ASAGHDKKVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWD 580
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/87 (21%), Positives = 41/87 (47%)
Frame = +3
Query: 165 NIKLVCANYVVGRTPRRNFHRQISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGA 344
+I C V G + + F + F +A + + I+++ + V + KGH+
Sbjct: 624 DINASCVRAVKGASTQVRFQPRTGQ----FLAAASENTVSIFDIENNNKRVNIFKGHSSN 679
Query: 345 IMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ +C+SP+G L +++ V +W +
Sbjct: 680 VHSVCWSPNG-ELVASVSEDAVKLWSL 705
Score = 34.3 bits (75), Expect = 0.036
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDV 425
A++ FD+ I IW+ + + GH +M + F P + L ++N + WD+
Sbjct: 568 ATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI 625
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.9 bits (89), Expect = 7e-04
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
ASAG D+++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD
Sbjct: 526 ASAGHDKKVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWD 580
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/87 (21%), Positives = 41/87 (47%)
Frame = +3
Query: 165 NIKLVCANYVVGRTPRRNFHRQISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGA 344
+I C V G + + F + F +A + + I+++ + V + KGH+
Sbjct: 624 DINASCVRAVKGASTQVRFQPRTGQ----FLAAASENTVSIFDIENNNKRVNIFKGHSSN 679
Query: 345 IMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ +C+SP+G L +++ V +W +
Sbjct: 680 VHSVCWSPNG-ELVASVSEDAVKLWSL 705
Score = 34.3 bits (75), Expect = 0.036
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDV 425
A++ FD+ I IW+ + + GH +M + F P + L ++N + WD+
Sbjct: 568 ATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI 625
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.9 bits (89), Expect = 7e-04
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
ASAG D+++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD
Sbjct: 526 ASAGHDKKVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWD 580
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/87 (21%), Positives = 41/87 (47%)
Frame = +3
Query: 165 NIKLVCANYVVGRTPRRNFHRQISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGA 344
+I C V G + + F + F +A + + I+++ + V + KGH+
Sbjct: 624 DINASCVRAVKGASTQVRFQPRTGQ----FLAAASENTVSIFDIENNNKRVNIFKGHSSN 679
Query: 345 IMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ +C+SP+G L +++ V +W +
Sbjct: 680 VHSVCWSPNG-ELVASVSEDAVKLWSL 705
Score = 34.3 bits (75), Expect = 0.036
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDV 425
A++ FD+ I IW+ + + GH +M + F P + L ++N + WD+
Sbjct: 568 ATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI 625
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
TFA+ D+ IW+ E+V V+KG+ GA+ + F+ DG ++ + V ++D
Sbjct: 333 TFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYD 390
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+ + +KGH + P+G TG D T +WD
Sbjct: 310 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWD 347
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
TFA+ D+ IW+ E+V V+KG+ GA+ + F+ DG ++ + V ++D
Sbjct: 327 TFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYD 384
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+ + +KGH + P+G TG D T +WD
Sbjct: 304 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWD 341
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 231 ISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGS--HLYTGATD 401
+SS ASA D I +W + V V++GHTGA+ + FSP GS L + + D
Sbjct: 295 VSSNNIFIASASNDCVIRVWRLPDGLP-VSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDD 353
Query: 402 NTVAVWD 422
T +WD
Sbjct: 354 GTCRIWD 360
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
+N+ ++GH A+ G ++ TG+ D V VW + T
Sbjct: 236 QNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDT 276
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 428
DR + +W++ + +GH G I L S + + + + D + VW +P
Sbjct: 266 DRLVKVWSM-DTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLP 317
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 243 RQTFASAGFDR-QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
R+ +S GF + Q+ +W Y + + GHT ++ + SPDG + + A D T+ W
Sbjct: 371 RELLSSHGFTQNQLTLWK-YPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFW 429
Query: 420 DV 425
+V
Sbjct: 430 NV 431
Score = 34.3 bits (75), Expect = 0.036
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+ G D I+ +V + V +GHT + L +S G L +G DN V +WD
Sbjct: 240 TGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 294
Score = 33.1 bits (72), Expect = 0.083
Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 270 DRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
D + +W+ G ++ + G + + ++PDG H+ G ++ V +WD
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWD 210
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 243 RQTFASAGFDR-QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
R+ +S GF + Q+ +W Y + + GHT ++ + SPDG + + A D T+ W
Sbjct: 361 RELLSSHGFTQNQLTLWK-YPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFW 419
Query: 420 DV 425
+V
Sbjct: 420 NV 421
Score = 34.3 bits (75), Expect = 0.036
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+ G D I+ +V + V +GHT + L +S G L +G DN V +WD
Sbjct: 230 TGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
Score = 33.1 bits (72), Expect = 0.083
Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 270 DRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
D + +W+ G ++ + G + + ++PDG H+ G ++ V +WD
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWD 200
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
A+A D+ + IWN+ G + V+ GH + FS DG +L T ++D T +W +
Sbjct: 233 ATASSDKTVKIWNLDG-FKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSM 288
Score = 30.7 bits (66), Expect = 0.44
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
HT +M + F G +Y+G+ D +V +WD+
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDL 113
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +3
Query: 192 VVGRTPRRNFHRQISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 371
+VGR + + ++S T A G + IL+ + + E + +K + G++ L FS D
Sbjct: 328 LVGREEKSLEYFEVSQDSNTIAFVGNEGYILLVSTKTK-ELIGTLKMN-GSVRSLAFSED 385
Query: 372 GSHLYTGATDNTVAVWDVPT 431
G HL + D V VWD+ T
Sbjct: 386 GKHLLSSGGDGQVYVWDLRT 405
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 39.1 bits (87), Expect = 0.001
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 315 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
V +GHT I LCFS DG + + + D ++ +WDV
Sbjct: 550 VREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDV 586
Score = 30.3 bits (65), Expect = 0.59
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 243 RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
R AS G I IWN+ + ++ H +I+ L F + L + + DN++ +W
Sbjct: 237 RPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMW 295
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 39.1 bits (87), Expect = 0.001
Identities = 16/59 (27%), Positives = 34/59 (57%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
TF++ D+ +W++ ++V V++G+ GAI + ++ DG ++ + V V+DV
Sbjct: 331 TFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDV 389
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ + + GH + PDG TG D T VWD+
Sbjct: 308 KTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDI 346
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 243 RQTFASAGFDR-QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
R+ ++ GF + Q+ +W Y + + GHT ++ + SPDG + + A D T+ +W
Sbjct: 341 RELLSAHGFTQNQLTLWK-YPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLW 399
Query: 420 DV 425
+V
Sbjct: 400 NV 401
Score = 33.1 bits (72), Expect = 0.083
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+ G D +I+ +V + + GHT + L +S G L +G DN V +WD
Sbjct: 210 TGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWD 264
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
F S D +W+ V GH G + + F PDG TG+ D T ++D+ T
Sbjct: 220 FISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRT 279
Score = 30.3 bits (65), Expect = 0.59
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
++GHTG + L ++P+ + + + + D + VW+ T
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALT 96
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 321 VMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPT 431
++ GH G + + P + +HL T + D T +WDV T
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTT 188
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +1
Query: 112 ISVVGTREKAVVTSSVPRTSNLY------APIMLLEGHQGEIFTGKFHPEG 246
+S+ G+ ++ S T+ L+ + GH+G++ T KF P+G
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 260
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
F S D +W+ V GH G + + F PDG TG+ D T ++D+ T
Sbjct: 158 FISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRT 217
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 321 VMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPT 431
++ GH G + + P + +HL T + D T +WDV T
Sbjct: 89 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTT 126
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
H I L S DGS L TG+ D+ + +W
Sbjct: 278 HRNRISCLGLSADGSALCTGSWDSNLKIW 306
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +1
Query: 112 ISVVGTREKAVVTSSVPRTSNLY------APIMLLEGHQGEIFTGKFHPEG 246
+S+ G+ ++ S T+ L+ + GH+G++ T KF P+G
Sbjct: 148 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 198
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
F S D +W+ V GH G + + F PDG TG+ D T ++D+ T
Sbjct: 220 FISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRT 279
Score = 30.3 bits (65), Expect = 0.59
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
++GHTG + L ++P+ + + + + D + VW+ T
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALT 96
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 321 VMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPT 431
++ GH G + + P + +HL T + D T +WDV T
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTT 188
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
H I L S DGS L TG+ D+ + +W
Sbjct: 340 HRNRISCLGLSADGSALCTGSWDSNLKIW 368
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +1
Query: 112 ISVVGTREKAVVTSSVPRTSNLY------APIMLLEGHQGEIFTGKFHPEG 246
+S+ G+ ++ S T+ L+ + GH+G++ T KF P+G
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 260
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 410
FA++ FD+ + +W++ + T + +CFSPD +L A DN V
Sbjct: 599 FATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEV 651
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 38.7 bits (86), Expect = 0.002
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 315 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
V V++GH ++M + F P S L+TG+ D + +WD
Sbjct: 10 VAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWD 45
Score = 36.3 bits (80), Expect = 0.009
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
A+AG+D +I ++N Y + + ++K H + +SPD + + + D TVA+W
Sbjct: 324 ATAGWDHRIRVYN-YRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALW 377
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +3
Query: 234 SS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVA 413
SS + SA D+ + +W+V + + GHT + F+P + + +G+ D TV
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETG-SLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 414 VWDVPT 431
+WDV T
Sbjct: 139 IWDVTT 144
Score = 36.3 bits (80), Expect = 0.009
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
S FD + IW+V G+C + V+ H+ + + F+ DGS + + + D +WD T
Sbjct: 130 SGSFDETVRIWDVTTGKC--LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Score = 34.3 bits (75), Expect = 0.036
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 228 QISS*RQTFASAGFDRQILIWNVYGQ----CENVMVMKGHTGAIMQLCFSPDGSHLYTGA 395
+ SS + ASA D+ I + + E V GH I + FS D + + +
Sbjct: 31 KFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSAS 90
Query: 396 TDNTVAVWDVPT 431
D T+ +WDV T
Sbjct: 91 DDKTLKLWDVET 102
Score = 31.9 bits (69), Expect = 0.19
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNV-YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
S+ +D IW+ G C ++ + + FSP+G + G DNT+ +W++
Sbjct: 172 SSSYDGLCRIWDSGTGHCVKTLI-DDENPPVSFVRFSPNGKFILVGTLDNTLRLWNI 227
Score = 30.3 bits (65), Expect = 0.59
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
S D + +W + + + + ++GHT +M + P + + +G+ D TV +W
Sbjct: 260 SGSEDNCVHMWELNSK-KLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
Q A+ D ++ +WNV G C + HT A+ L F D L + + D TV WD
Sbjct: 362 QLLATGADDNKVKVWNVMSGTC--FITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 419
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
Q AS+ +D + +W+V+ V + H ++ + F PDG L + D + WD
Sbjct: 490 QLLASSSWDYTVRLWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWD 547
Score = 37.5 bits (83), Expect = 0.004
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 276 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
Q+L+W+ + ++ +GH + + +SPD L TGA DN V VW+V
Sbjct: 330 QLLVWDWRTETY-ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNV 378
Score = 31.5 bits (68), Expect = 0.25
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+I +W+ GQ ++++ GH + L FSP L + + D TV +WDV
Sbjct: 458 EIFVWSKKTGQIKDIL--SGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDV 506
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
Q A+ D ++ +WNV G C + HT A+ L F D L + + D TV WD
Sbjct: 402 QLLATGADDNKVKVWNVMSGTC--FITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 459
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
Q AS+ +D + +W+V+ V + H ++ + F PDG L + D + WD
Sbjct: 530 QLLASSSWDYTVRLWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWD 587
Score = 37.5 bits (83), Expect = 0.004
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 276 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
Q+L+W+ + ++ +GH + + +SPD L TGA DN V VW+V
Sbjct: 370 QLLVWDWRTETY-ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNV 418
Score = 31.5 bits (68), Expect = 0.25
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+I +W+ GQ ++++ GH + L FSP L + + D TV +WDV
Sbjct: 498 EIFVWSKKTGQIKDIL--SGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDV 546
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +3
Query: 279 ILIWNVYGQCEN-----VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
IL+W E+ + ++GH+G + CF+ G LY+G+ D T+ +WD+ T
Sbjct: 234 ILVWKATTDSESDPFKYLTSLEGHSGEVT--CFAVGGQMLYSGSVDKTIKMWDLNT 287
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/45 (22%), Positives = 20/45 (44%)
Frame = +3
Query: 288 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
W+ + V ++GH + + L++ + D T+ VWD
Sbjct: 115 WSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWD 159
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 37.5 bits (83), Expect = 0.004
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 327 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
KGHTGA+ + G + +G+TD +V +W+V T
Sbjct: 420 KGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVET 454
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 231 ISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 410
++S F S G DRQ+ W+V + +GH G + + F+ S + + D ++
Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDV-STGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSL 126
Query: 411 AVWD 422
VWD
Sbjct: 127 RVWD 130
Score = 35.5 bits (78), Expect = 0.016
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 321 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
++KGH GA++ F+ DG++ T D T+ +W+
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 37.1 bits (82), Expect = 0.005
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 327 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
+GHT + F+ DGS + T ++D TV VWD T
Sbjct: 344 RGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKT 378
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 360 FSPDGSHLYTGATDNTVAVWD 422
FSPDG L + + D + VWD
Sbjct: 221 FSPDGQFLASSSVDGFIEVWD 241
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
SA D+ I IWN + V V+ GH +M F P + + + D TV VWD+
Sbjct: 110 SASDDQTIRIWNWQSRT-CVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
S DRQ+ +W + + V ++GH + + F + + + D ++ VWD
Sbjct: 221 SGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 249 TFASAGFDRQILIW-NVYGQCENVMV--MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
T + DR+I +W G+ + +V ++ H A+ L + DGS L++G+ D ++ VW
Sbjct: 248 TVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVW 307
Query: 420 D 422
+
Sbjct: 308 E 308
Score = 34.7 bits (76), Expect = 0.027
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
S +D+ + IW +C+ + K H A+ + S +G+ +YTG+ D + VW PT
Sbjct: 210 SVSWDKTLKIWRASDLRCKESI--KAHDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPT 265
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 243 RQTFASAGFDR-QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
R+ +S GF + Q+ +W Y + + GHT ++ + SP+G + + A D + +W
Sbjct: 355 RELLSSHGFTQNQLTLWK-YPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLW 413
Query: 420 DV 425
+V
Sbjct: 414 NV 415
Score = 29.9 bits (64), Expect = 0.78
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+ G D +I+ +V + V GHT + L +S G L +G N V +WD
Sbjct: 223 TGGMDGKIVNNDVRIRSSIVGTYLGHTEEVCGLKWSESGKKLASGGNYNVVHIWD 277
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 243 RQTFASAGFDR-QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
R+ +S GF + Q+ +W Y + + GHT ++ + SP+G + + A D + +W
Sbjct: 357 RELLSSHGFTQNQLTLWK-YPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLW 415
Query: 420 DV 425
+V
Sbjct: 416 NV 417
Score = 31.9 bits (69), Expect = 0.19
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+ G D +I+ +V + V GHT + L +S G+ +G DN V +WD
Sbjct: 226 TGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWD 280
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 36.7 bits (81), Expect = 0.007
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 243 RQTFASAGF-DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDN-TVAV 416
+Q F ++G D Q+ IW+ + ++ + GH GA+ + +SP H+ A+D+ T+ +
Sbjct: 500 KQAFIASGSEDSQVYIWH-RSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRI 558
Query: 417 W 419
W
Sbjct: 559 W 559
Score = 31.5 bits (68), Expect = 0.25
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ +++ HT + L FS +G +L + + D T +W++
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEI 303
Score = 31.5 bits (68), Expect = 0.25
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 228 QISS*RQTFASAGFDRQILIWNVY--GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATD 401
Q S + AS+ D+ +IW + G + GH ++ + +SPD + T +
Sbjct: 281 QFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAE 340
Query: 402 NTVAVWDV 425
+ WDV
Sbjct: 341 EVIRRWDV 348
Score = 29.9 bits (64), Expect = 0.78
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNV-YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ G + I W+V G C + M KG I + PDG + G TD ++ +WD+
Sbjct: 336 TCGAEEVIRRWDVDSGDCVH-MYEKGGISPI-SCGWYPDGQGIIAGMTDRSICMWDL 390
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGA--IMQLCFSP-DGSHLYTGATDNTVAVW 419
+++I +WN+ G + V KGH + I++ CF + + +G+ D+ V +W
Sbjct: 464 NQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIW 516
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 36.7 bits (81), Expect = 0.007
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
FASA +R+ ++W+ + + M H+ I L +SP+ + + TG+ D V V++V
Sbjct: 506 FASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEV 563
Score = 35.5 bits (78), Expect = 0.016
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 330 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
GH G+I + +SPDG + T + D + +WD+
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDI 261
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 264 GFDRQILIWNVYGQC-ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
G D ++ ++++ G V++ H GAI + +SPD S + + VWD
Sbjct: 466 GQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLSMFASADLNREAVVWD 519
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
SA D+ I IWN + + V+ GH +M F P + + + D TV VWD+
Sbjct: 110 SASDDQTIRIWNWQSRT-CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 32.3 bits (70), Expect = 0.15
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
F S G D +I +WN Y + + GH I + F + + + + D T+ +W+
Sbjct: 66 FVSGGDDYKIKVWN-YKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWN 121
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
S DRQ+ +W + + V ++GH + + F + + + D ++ VWD
Sbjct: 221 SGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 36.3 bits (80), Expect = 0.009
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Frame = +3
Query: 243 RQTFASAGFDRQILIWNVYGQCENVM--VMKG---HTGAIMQLCFSPDGSHLYTGATDNT 407
R+ AS ++ IW ++ N V K H ++ L +SPD ++L +G+ DN+
Sbjct: 17 RELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNS 76
Query: 408 VAVWDV 425
+WDV
Sbjct: 77 CIIWDV 82
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 36.3 bits (80), Expect = 0.009
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
++ H GAI+ + FSPDG +L + D + VW V
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
Score = 29.9 bits (64), Expect = 0.78
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
F S D ++ IW+ QC+ V+ G + +C+ PDG + G + ++V
Sbjct: 412 FISGSIDGKVRIWSA-SQCQ-VVDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNV 467
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 109 EISVVGTREKAVVTSSVPRTSNLYAPIML---LEGHQGEIFTGKFHPEGKHL 255
E++V G+R + V + + + + ++ H+G I KF P+G++L
Sbjct: 215 EVAVCGSRIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYL 266
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 36.3 bits (80), Expect = 0.009
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
++ H GAI+ + FSPDG +L + D + VW V
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
Score = 29.9 bits (64), Expect = 0.78
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
F S D ++ IW+ QC+ V+ G + +C+ PDG + G + ++V
Sbjct: 412 FISGSIDGKVRIWSA-SQCQ-VVDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNV 467
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 109 EISVVGTREKAVVTSSVPRTSNLYAPIML---LEGHQGEIFTGKFHPEGKHL 255
E++V G+R + V + + + + ++ H+G I KF P+G++L
Sbjct: 215 EVAVCGSRIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYL 266
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 36.3 bits (80), Expect = 0.009
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 267 FDRQILIW-NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
FD +W N E+V V++GH + + ++ GS L T D +V +W++
Sbjct: 68 FDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEI 121
Score = 34.3 bits (75), Expect = 0.036
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +3
Query: 255 ASAGFDRQILIWNVY----GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
A+ G D+ + IW + + + + V+ GH+ + + + P L++ + DNT+ +W
Sbjct: 108 ATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIW 166
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 36.3 bits (80), Expect = 0.009
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
A+AG D I + N + V V+KGH G + L F P+G L + T TV W++
Sbjct: 120 AAAGDDEGIKLINTFDG-SIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWEL 175
Score = 34.3 bits (75), Expect = 0.036
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKG-HTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+T A G +++++ + E + ++G H AI L ++P+G ++ T D V +WD
Sbjct: 208 RTLAVPGLRNDVVMYDRFTG-EKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWD 266
Query: 423 V 425
V
Sbjct: 267 V 267
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 35.9 bits (79), Expect = 0.012
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 270 DRQILIWNV---YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
D I IW++ +G ++ V K HT I + FS DG L + + D ++ VWD+
Sbjct: 348 DGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDL 402
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 35.5 bits (78), Expect = 0.016
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVW 419
Q F S G D +++W+ G + V K H + + ++P D + + TG+ DNTV V+
Sbjct: 295 QEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVF 354
Query: 420 D 422
D
Sbjct: 355 D 355
Score = 31.1 bits (67), Expect = 0.34
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 267 FDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWD 422
FDR+ L N G V +GH A++ + +SPD S ++ + A D + +WD
Sbjct: 354 FDRRNLTSNGVGS--PVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 404
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 35.5 bits (78), Expect = 0.016
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
FAS +R+ ++W+ + + M HT I L +SP+ + TG+ D V V++V
Sbjct: 371 FASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVIVYEV 428
Score = 32.3 bits (70), Expect = 0.15
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 330 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
GH G+I + +SPD + T + D + VW+V
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEV 125
Score = 30.7 bits (66), Expect = 0.44
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 264 GFDRQILIWNVYGQ--CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
G D ++ I++V G + V++ H GA+ + +SPD + +G + VWD T
Sbjct: 330 GQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRET 387
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 35.5 bits (78), Expect = 0.016
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
+ F + G D + +++ Y E + KGH G + + F+P G +G+ D T+ +W
Sbjct: 241 EKFVAGGEDMWVRVFDFYTG-EEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 35.5 bits (78), Expect = 0.016
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
+ F + G D + +++ Y E + KGH G + + F+P G +G+ D T+ +W
Sbjct: 241 EKFVAGGEDMWVRVFDFYTG-EEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 35.1 bits (77), Expect = 0.021
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCEN-VMVMKGHTGAIMQLCF-SPDGSH----------LYTGATD 401
S D++I +W G+ V V+ GHTG + L P G LY+G+ D
Sbjct: 281 SGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLYSGSLD 340
Query: 402 NTVAVWDVP 428
+V VW VP
Sbjct: 341 KSVKVWRVP 349
Score = 33.1 bits (72), Expect = 0.083
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
SA +DR + +W ++ + + +K H A+ + + S ++TG+ D TV VW
Sbjct: 152 SASWDRTVKVWRIH-DLKCIESIKAHDDAVNSVTTAE--SLVFTGSADGTVKVW 202
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 303 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+C + +K H+ A+ L + D LY+ + D TV VW +
Sbjct: 125 RCRTALWIK-HSDAVSCLSLAEDQGLLYSASWDRTVKVWRI 164
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 321 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
V K H A+ LC + G L++GA D + VW
Sbjct: 261 VFKKHRLAV--LCIAAAGKLLFSGAADKKICVW 291
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 35.1 bits (77), Expect = 0.021
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
A+ D +W++ E+ V+KG+ GAI L F+P+G L + V ++D
Sbjct: 306 ATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFD 361
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 34.7 bits (76), Expect = 0.027
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 330 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
GH G + LCF + L++G+ D T+++W+
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWN 291
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 34.3 bits (75), Expect = 0.036
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
H ++ L +SPD ++L +G+ DN+ +WDV
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDV 141
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Frame = +3
Query: 255 ASAGFDRQILIWNVY-GQCENVMV-------MKGHTGAIMQLCFSPDGSHLYTGATDNTV 410
A+AG D I +W + GQ E + + H A+ + FSP G L +GA +
Sbjct: 29 ATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGEL 88
Query: 411 AVW 419
+W
Sbjct: 89 FIW 91
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 34.3 bits (75), Expect = 0.036
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
H ++ L +SPD ++L +G+ DN+ +WDV
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDV 141
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Frame = +3
Query: 255 ASAGFDRQILIWNVY-GQCENVMV-------MKGHTGAIMQLCFSPDGSHLYTGATDNTV 410
A+AG D I +W + GQ E + + H A+ + FSP G L +GA +
Sbjct: 29 ATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGEL 88
Query: 411 AVW 419
+W
Sbjct: 89 FIW 91
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 34.3 bits (75), Expect = 0.036
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 327 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
KGH ++ LC SP +G+ D +V +WD+
Sbjct: 111 KGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDL 143
Score = 29.5 bits (63), Expect = 1.0
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 339 GAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
G ++ F+PDG ++ +G+ D T+ W++
Sbjct: 245 GTPIEATFTPDGKYVLSGSGDGTLHAWNI 273
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 34.3 bits (75), Expect = 0.036
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDV 425
E + V+ G G + + FS DG++LYTG D + WD+
Sbjct: 246 ELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDI 285
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 34.3 bits (75), Expect = 0.036
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
A+ G D + I++ Q + V +K + GA++ +S DG +L TG D+ V VW +
Sbjct: 319 ATVGRDGYLRIFDFSTQ-KLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWSM 374
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 339 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
GAI + FS DG++L T D + ++D T
Sbjct: 304 GAINSIAFSNDGAYLATVGRDGYLRIFDFST 334
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 34.3 bits (75), Expect = 0.036
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
Q A+ D +W+V +++ V+KG+ GAI L F+ DG L + V ++D
Sbjct: 332 QILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDGRFLAMAEPADFVHLFD 390
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
++GH + P+G L TG D T +WDV
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDV 348
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 34.3 bits (75), Expect = 0.036
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
A+ G D + +W + G + + GH ++ L FS DG L +G D V ++D
Sbjct: 87 ATGGGDDKAFLWKI-GNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFD 141
Score = 33.9 bits (74), Expect = 0.048
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
A+ G D++++IW++ Q + H + L + +L TG + TV++WD
Sbjct: 303 ATGGMDKKLIIWDL--QHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWD 356
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
D + +WN + + + GH + F+PDG + TG+ D ++ VW+ T
Sbjct: 176 DCSLWMWNADKEAY-LNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKT 228
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 33.9 bits (74), Expect = 0.048
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+K H GAI+ + FS DG L + D V VW V
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKV 250
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 33.9 bits (74), Expect = 0.048
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 330 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
GH + L SPD + L TG+ D+TV +W +
Sbjct: 2666 GHCAPVTCLALSPDNNFLVTGSRDSTVLLWRI 2697
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 33.9 bits (74), Expect = 0.048
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
T S G D+Q +W + + V V H G I + + P + L TG+ D T+ WD
Sbjct: 86 TVFSGGCDKQAKMWPLLSGGQPVTVAM-HEGPIAAMAWIPGMNLLATGSWDKTLKYWD 142
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 33.9 bits (74), Expect = 0.048
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWD 422
A++ D+ + +W+V + V+ GH A+ ++ FSP L + D +V +WD
Sbjct: 209 ATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 33.5 bits (73), Expect = 0.063
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
H+G + CF G LY+G+ D T+ VWD+ T
Sbjct: 311 HSGEVT--CFVVGGEVLYSGSVDKTIKVWDLNT 341
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/45 (22%), Positives = 20/45 (44%)
Frame = +3
Query: 288 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
W+ + V ++GH I + L++ + D T+ +WD
Sbjct: 171 WSCFPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWD 215
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 33.5 bits (73), Expect = 0.063
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
S D I +W++ GQ + HT ++ L +P SH+Y+G D + + D+ T
Sbjct: 272 SGSSDSMIRLWDL-GQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLAT 328
Score = 31.9 bits (69), Expect = 0.19
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
S G ++ + +W+ ++ M ++GHT + L G +G++D+ + +WD+
Sbjct: 230 SGGTEKVLRVWDPRTGSKS-MKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
Score = 31.1 bits (67), Expect = 0.34
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 321 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
+ KGH ++ L + G+ L +G T+ + VWD T
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRT 244
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 33.5 bits (73), Expect = 0.063
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
S D I +W++ GQ + HT ++ L +P SH+Y+G D + + D+ T
Sbjct: 272 SGSSDSMIRLWDL-GQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLAT 328
Score = 31.9 bits (69), Expect = 0.19
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
S G ++ + +W+ ++ M ++GHT + L G +G++D+ + +WD+
Sbjct: 230 SGGTEKVLRVWDPRTGSKS-MKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
Score = 31.1 bits (67), Expect = 0.34
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 321 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
+ KGH ++ L + G+ L +G T+ + VWD T
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRT 244
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.5 bits (73), Expect = 0.063
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
H G+I+ + FSPDG ++ + D V VW +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSI 247
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.5 bits (73), Expect = 0.063
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
H G+I+ + FSPDG ++ + D V VW +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSI 247
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 33.1 bits (72), Expect = 0.083
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
DR ++++ + ++V+ GHT + F D + TG+TD ++ WD+
Sbjct: 234 DRNAYVYDIRRLVDPLIVLDGHTKTVTYARFM-DSHTIVTGSTDGSLKQWDI 284
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 33.1 bits (72), Expect = 0.083
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDV 425
F SAG D Q++IW++ V K H I L F+P L T ++D+TVA++D+
Sbjct: 234 FGSAGDDCQLVIWDLRTNQMQHQV-KVHEREINYLSFNPFNEWVLATASSDSTVALFDL 291
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 175 LYAPIMLLEGHQGEIFTGKFHPEGKHLLLQALTDK 279
L AP+ +L H+GE+F ++ P + +L + D+
Sbjct: 294 LTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDR 328
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 33.1 bits (72), Expect = 0.083
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 270 DRQILIW--NVYGQC-ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
D IL+W N C + + GHT A++ L + LY+GA DN++ VW +
Sbjct: 242 DGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVG--ANRLYSGAMDNSIKVWSL 294
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/50 (24%), Positives = 20/50 (40%)
Frame = +3
Query: 273 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
R + W+ + + GH + + LYT + D TV +WD
Sbjct: 123 RYLHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWD 172
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 33.1 bits (72), Expect = 0.083
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +3
Query: 258 SAGFDRQILIWN--VYGQCENVMVMKGHTGAIMQLCFSPD----GSHLYTGATDNTVAVW 419
S D+ I +W V G V+ GH G + L SP+ G LY+G D ++ VW
Sbjct: 333 SGSADKSIGLWRREVTGMLCKFGVIHGHEGPVKCLQASPNNVGAGFMLYSGGLDKSLRVW 392
Query: 420 DVP 428
VP
Sbjct: 393 WVP 395
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 33.1 bits (72), Expect = 0.083
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
++ H GA+ + FS D +L +G D + VW+V
Sbjct: 400 IQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEV 433
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 33.1 bits (72), Expect = 0.083
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
D + W Q ++KGH A+ LC GS +++G+ D T+ VW
Sbjct: 316 DGLVNFWEREKQLNYGGILKGHKLAV--LCLEVAGSLVFSGSADKTICVW 363
Score = 29.5 bits (63), Expect = 1.0
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 10/66 (15%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVM-VMKGHTGAIMQLCFSPDGSH---------LYTGATDNT 407
S D+ I +W G + V+ GHTG + L D +Y+G+ D +
Sbjct: 353 SGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKS 412
Query: 408 VAVWDV 425
V VW V
Sbjct: 413 VKVWGV 418
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 33.1 bits (72), Expect = 0.083
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
H+ + L FS DG++LY+G + + VW + T
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDT 314
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 32.7 bits (71), Expect = 0.11
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 291 NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
N G+ E V+ G + L F+P+GS L GA D T+ V+ P+
Sbjct: 138 NQAGESEEVIKELRDVGQQLALAFNPEGSVLAAGAEDGTLRVFKWPS 184
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 32.7 bits (71), Expect = 0.11
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 318 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
++++GH ++ CF+ + LYT +D + VW
Sbjct: 393 LMLRGHYESVNTCCFNSNDQELYTSGSDRQILVW 426
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
H GA+ L + DG +L + +D+ + +WD+
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDI 341
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMV 323
Q ++G DRQIL+W+ G E+ MV
Sbjct: 412 QELYTSGSDRQILVWSPGGTVEDEMV 437
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDV 425
+ GH +M + +S LYTG D + WD+
Sbjct: 186 LSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 32.3 bits (70), Expect = 0.15
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 228 QISS*RQTFASAGFDRQILIWNVY--GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATD 401
Q S+ + A+A D +IW V + E ++ H + + +SPD + L T
Sbjct: 231 QFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNA 290
Query: 402 NTVAVWDVPT 431
+ +WDV T
Sbjct: 291 EVLKLWDVDT 300
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 32.3 bits (70), Expect = 0.15
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 255 ASAGFDRQ-ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
ASA +D IW+V Q + +G G I L +SP G + + D T +W+ T
Sbjct: 228 ASASYDSSSFTIWDV-SQGAGTPIRRG-LGGISMLKWSPTGDYFFAARFDGTFCLWETNT 285
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 32.3 bits (70), Expect = 0.15
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
F + G D + +++ + E + KGH G + + F+P G +G+ D T+ +W
Sbjct: 243 FVAGGEDMWVRLFDFHTGKE-IGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 32.3 bits (70), Expect = 0.15
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVW 419
Q F S G D +++W+ G V K H + + ++P D + + TG+ DNTV ++
Sbjct: 306 QEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLF 365
Query: 420 D 422
D
Sbjct: 366 D 366
Score = 30.7 bits (66), Expect = 0.44
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 267 FDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWD 422
FDR+ L N G + +GH A++ + +SPD S ++ + A D + +WD
Sbjct: 365 FDRRKLTANGVGS--PIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 415
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 32.3 bits (70), Expect = 0.15
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 318 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
++++GH ++ CF+ + LYT D + VW
Sbjct: 393 LMLRGHYESVNTCCFNSNDQELYTSGADRQIIVW 426
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDV 425
+ GH +M + +S LYTG D + WD+
Sbjct: 186 LSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 32.3 bits (70), Expect = 0.15
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 249 TFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
TF + G D + ++ + E + KGH G + + ++P G +G+ D TV +W V
Sbjct: 237 TFIAGGEDMWVHRFD-FQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVV 294
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 31.9 bits (69), Expect = 0.19
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
F S D I W V + + + H ++ L + P G L +G+ D+T W
Sbjct: 368 FVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.9 bits (69), Expect = 0.19
Identities = 10/38 (26%), Positives = 25/38 (65%)
Frame = +3
Query: 312 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+++ + GH G+I ++ +S DGS + + + D + +W++
Sbjct: 227 HMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEI 264
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
S DR IW + Q V+ GH+ + C S S + T D T VW V
Sbjct: 252 SVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS--DSLIVTAGEDCTCRVWGV 305
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.9 bits (69), Expect = 0.19
Identities = 10/38 (26%), Positives = 25/38 (65%)
Frame = +3
Query: 312 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+++ + GH G+I ++ +S DGS + + + D + +W++
Sbjct: 227 HMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEI 264
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
S DR IW + Q V+ GH+ + C S S + T D T VW V
Sbjct: 252 SVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS--DSLIVTAGEDCTCRVWGV 305
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 31.9 bits (69), Expect = 0.19
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +3
Query: 255 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
A+ G D + I++ Q + V K + GA++ +S DG ++ TG D+ V VW +
Sbjct: 319 ATVGRDGYLRIFDFLTQ-KLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQVWSM 374
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 31.9 bits (69), Expect = 0.19
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 428
E V GH A+ + F PD H+ + A+D + VW +P
Sbjct: 603 ELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVWKLP 642
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 31.5 bits (68), Expect = 0.25
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 428
D + W +N V+KGH A+ LC G+ +++G+ D + VW P
Sbjct: 321 DGTVNFWERENNMKNGGVLKGHKLAV--LCLVAAGNLMFSGSADLGIRVWRRP 371
Score = 29.9 bits (64), Expect = 0.78
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 231 ISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 410
+S ++ S +D+ +W V V + H A+ + DG ++TG+ D TV
Sbjct: 219 LSEDKRLLYSGSWDKTFKVWRV-SDLRCVESVNAHEDAVNAVVSGFDGL-VFTGSADGTV 276
Query: 411 AVW 419
VW
Sbjct: 277 KVW 279
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
H AI L S D LY+G+ D T VW V
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRV 240
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 31.5 bits (68), Expect = 0.25
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
F +AG D W+V + M KGH+ + + S + TG+ D T +WD T
Sbjct: 175 FTAAG-DSCAYCWDVESG-KIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKT 232
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 31.5 bits (68), Expect = 0.25
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 225 RQISS*RQTFASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATD 401
R I T + D +W+V G C+ V+ H G + + +SP + TG+ D
Sbjct: 1026 RSIRMVEDTLITGSDDWTARVWSVSRGSCDAVLAC--HAGPVQSVEYSPFDKGIITGSAD 1083
Query: 402 NTVAVWD 422
+ W+
Sbjct: 1084 GLLRFWE 1090
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 31.1 bits (67), Expect = 0.34
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDV 425
F SAG D +++IW+ V K H + L F+P L T ++D+TVA++D+
Sbjct: 233 FGSAGEDGRLVIWDTRTNQMQHQV-KVHEREVNYLSFNPFNEWVLATASSDSTVALFDL 290
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 175 LYAPIMLLEGHQGEIFTGKFHPEGKHLLLQALTDK 279
L AP+ ++ H+GE+F ++ P + +L + D+
Sbjct: 293 LNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDR 327
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 30.7 bits (66), Expect = 0.44
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +3
Query: 270 DRQILIW--NVYGQC-ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
D IL W N C E + GHT A++ L + LY+G+ D T+ VW +
Sbjct: 249 DGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVG--ANRLYSGSMDKTIKVWSL 301
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+ GH + + LYTG+ D T+ VWD
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWD 179
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +3
Query: 279 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ IW+V + ++ H G L S G L+TG D + ++++
Sbjct: 317 VYIWDVSSETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEI 365
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 243 RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHL 383
R +AG D + +W+ G+ + +K H+ +CFSP +
Sbjct: 191 RHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKI 237
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 30.3 bits (65), Expect = 0.59
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 ASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
ASAG D + +WNV+ + V H + + +S G L + D T ++DV
Sbjct: 177 ASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDV 234
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 327 KGH--TGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+GH G ++ FSPDG L +G++D +V ++D
Sbjct: 381 EGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYD 414
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 30.3 bits (65), Expect = 0.59
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
S +DR + IW +C H AI + S +G +YTG++D + VW
Sbjct: 182 SVSWDRTLKIWRTTDFKCLESFT-NAHDDAINAVALSENGD-IYTGSSDQRIKVW 234
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
H A+ L S DG+ LY+ + D T+ +W
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIW 192
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVM-KGH-------TGAIMQLCFSPDGS-HLYTGATDNTV 410
S D+ + +W + + + M +GH TGA + + S H+Y+G D+ V
Sbjct: 320 SGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGGLDSQV 379
Query: 411 AVWDV 425
VW V
Sbjct: 380 KVWQV 384
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
H G+I+ + FS DG +L + D V VW++
Sbjct: 256 HDGSIVVMKFSHDGKYLASAGEDCVVRVWNI 286
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
H G + + F+ DG L +G+ D V +WD T
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQT 86
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP--DGSHLYTGATDNTV 410
S DRQ+++W+ + GH I Q F P D + T A D V
Sbjct: 72 SGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQV 124
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 30.3 bits (65), Expect = 0.59
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 321 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
++ GH A+ F D L T +TDNT+ +WD+
Sbjct: 877 ILSGHNKAVSYAKFL-DNETLVTASTDNTLKLWDL 910
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 30.3 bits (65), Expect = 0.59
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 264 GFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
G I +W V + + GH ++ L FS D S L +G+ D ++ VW +
Sbjct: 97 GISGDIYLWEV-ATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 342 AIMQLCFSPDGSHLYTGATDNTVAVWD 422
AI L + DG+ L +G+ D V VWD
Sbjct: 265 AITCLAYCADGNLLISGSEDGVVCVWD 291
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +3
Query: 279 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ +W Q V M+ H G + + F P+G + T + + +WD+
Sbjct: 263 VTMWKPTSQAPLVQ-MQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDL 310
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 115 SVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTGKFHPEGKHLL 258
SVVG + TS AP++ ++ H G + + FHP G HL+
Sbjct: 252 SVVGLGHSGGTVTMWKPTSQ--APLVQMQCHPGPVSSVAFHPNG-HLM 296
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.9 bits (64), Expect = 0.78
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 303 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
+ E V+ G + L F+ DG+ L TGA D T+ V++ P+
Sbjct: 131 ESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPS 173
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 231 ISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDN 404
+S+ + A + +LI + N +V K H G + L FSPD L + + D+
Sbjct: 283 VSADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDS 340
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.9 bits (64), Expect = 0.78
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 303 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
+ E V+ G + L F+ DG+ L TGA D T+ V++ P+
Sbjct: 131 ESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPS 173
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 231 ISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDN 404
+S+ + A + +LI + N +V K H G + L FSPD L + + D+
Sbjct: 283 VSADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDS 340
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 29.9 bits (64), Expect = 0.78
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
DR+ ++++ + + ++GHT + + F DG + T TD + +W V
Sbjct: 91 DRKGYVYDIRKLVDPALTLQGHTKTVSYVRFL-DGGTVVTAGTDGCLKLWSV 141
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 29.9 bits (64), Expect = 0.78
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 321 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
++KGH A+ LC G+ L +G+ D + VW
Sbjct: 362 ILKGHKSAV--LCLGIAGNLLLSGSADKNICVW 392
Score = 26.2 bits (55), Expect = 9.6
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
S+ +D I +W + + + + H AI + D ++TG+ D TV VW
Sbjct: 252 SSSWDTTIKVWRI-ADSKCLESIHAHDDAINSVMSGFDDL-VFTGSADGTVKVW 303
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 29.9 bits (64), Expect = 0.78
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
E+ H+ + L FS DG+ LY+G VW++ T
Sbjct: 237 ESCTTFNWHSAEVTVLNFSSDGALLYSGVKAGDFVVWELGT 277
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 29.9 bits (64), Expect = 0.78
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
++ A D ++ +++ + M GH+ + + F D S L + +TDNT+ +WD+
Sbjct: 674 RSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFV-DSSTLVSSSTDNTLKLWDL 732
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 29.9 bits (64), Expect = 0.78
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWD 422
S G D + W+V G + + GH + SP + S L TG+ D+TV VWD
Sbjct: 153 SGGDDGVVKYWDVAGATV-ISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWD 207
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 29.5 bits (63), Expect = 1.0
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
++GH G + L ++ +GS L +G+ D + +W+
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWN 78
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 243 RQTFASAGFDRQILIWNV-YGQCENVMVMKGHTGAIMQLCFSPDGSH-LYTGATDNTVAV 416
R ASA D+++ +W+V G C+ + M+ HT + + ++ L +G+ D TV +
Sbjct: 278 RNILASASADKKVKVWDVATGTCK--ITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVM 335
Query: 417 WD 422
D
Sbjct: 336 KD 337
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 243 RQTFASAGFDRQILIWNV-YGQCENVMVMKGHTGAIMQLCFSPDGSH-LYTGATDNTVAV 416
R ASA D+++ +W+V G C+ + M+ HT + + ++ L +G+ D TV +
Sbjct: 246 RNILASASADKKVKVWDVATGTCK--ITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVL 303
Query: 417 WD 422
D
Sbjct: 304 KD 305
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
++ H G+I + FS DG +L + D + +W V
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQV 442
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 428
H + FSPDG TG D ++ +++VP
Sbjct: 30 HKSVVRCARFSPDGMFFATGGADTSIKLFEVP 61
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 428
H + FSPDG TG D ++ +++VP
Sbjct: 122 HKSVVRCARFSPDGMFFATGGADTSIKLFEVP 153
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
++ H G+I + FS DG +L + D + +W V
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKV 392
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCEN-VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
S D ++ V+G E V GH ++ L +S HL + + D TV +WD+
Sbjct: 441 SVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSWSKS-QHLLSSSMDKTVRLWDL 496
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
++ H G I + FSPD L + D + VW+V
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEV 440
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA 395
F S D +I IWN+ + V+ + +C++PDG + G+
Sbjct: 575 FISGSLDAKIRIWNISNR--QVVEWNDLKEMVTAVCYTPDGQAAFVGS 620
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 196 LEGHQGEIFTGKFHPEGKHLLLQALTD 276
++ HQG I+T KF P+ HLL A D
Sbjct: 407 IQAHQGGIWTMKFSPD-SHLLASAGED 432
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 29.1 bits (62), Expect = 1.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
++ H G + + F+ +G L +G+ D V +WD
Sbjct: 55 LEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWD 87
>At4g22730.1 68417.m03279 leucine-rich repeat transmembrane protein
kinase, putative leucine rich repeat receptor-like
kinase, Oryza sativa, PATCHX:E267533
Length = 688
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 140 QLLLHLFHEHQTCMRQLCCWKDTKEKFSQANFILKANIC-FCRL*QTNINMECVWSMR 310
+LL L HE+ +R CC + E F +F K + F L + N+ WS R
Sbjct: 462 KLLSSLSHENLVKLRGFCCSRGRGECFLIYDFASKGKLSNFLDLQERETNLVLAWSAR 519
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 29.1 bits (62), Expect = 1.4
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +3
Query: 336 TGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+G + + +SPD +++G++D + WD
Sbjct: 198 SGRALSVTWSPDAKRIFSGSSDGLIRCWD 226
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Frame = +3
Query: 228 QISS*RQTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP--DGSHLYTGATD 401
+ +S S DRQI++WN + GH + Q F P D + T D
Sbjct: 62 EFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDRTIITSGAD 121
Query: 402 NTVAVWDV 425
V + +
Sbjct: 122 GQVRLGQI 129
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+ GH G + + F+ G L +G+ D + +W+
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWN 83
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = +2
Query: 35 KKCQI*KLKEKQRMCLLYPPSEYGMRSQ*SAPEK-----RQLLLHLFHEHQTCMRQLCCW 199
KKC + KEK M E + Q EK ++ LL L E + +RQLC W
Sbjct: 466 KKCVVEMKKEKDEMAKEKEEVEKKLEGQVREEEKEKEKLKETLLGLGEEKREAIRQLCIW 525
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 315 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
V ++ H + + + D + L TG+ D TV VWD+
Sbjct: 1039 VQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDI 1075
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+TG I L +S G H+YTG+ DNT+ W +
Sbjct: 586 YTG-IHALAYSEYG-HVYTGSGDNTIKAWSL 614
>At1g03380.1 68414.m00317 expressed protein
Length = 926
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 315 VMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV 425
V K HT I LCF P G+ L T + N + V+ +
Sbjct: 371 VSQFKAHTSPISALCFDPSGTLLVTASVCGNNINVFQI 408
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 264 GFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
G+D + + +++ + + KGH ++ L G +G+ D TV +WD
Sbjct: 97 GWDDSLRLLSLHDN-KYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 148
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 264 GFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
G+D + + +++ + + KGH ++ L G +G+ D TV +WD
Sbjct: 94 GWDDSLRLLSLHDN-KYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 145
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 321 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
+ K H G++ ++ P S TG+ D V +WD
Sbjct: 2370 IPKAHLGSVTKIATIPRTSLFLTGSKDGEVKLWD 2403
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
++ A D ++ +++ + M GH + + F D S L + +TDNT+ +WD+
Sbjct: 632 RSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWDL 690
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +3
Query: 246 QTFASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
++ A D ++ +++ + M GH + + F D S L + +TDNT+ +WD+
Sbjct: 632 RSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWDL 690
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/53 (18%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 276 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDVPT 431
+++I ++ V ++ H ++ + ++P H+ +G D +W++PT
Sbjct: 244 KVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 296
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/53 (18%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 276 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDVPT 431
+++I ++ V ++ H ++ + ++P H+ +G D +W++PT
Sbjct: 244 KVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 296
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/53 (18%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 276 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDVPT 431
+++I ++ V ++ H ++ + ++P H+ +G D +W++PT
Sbjct: 244 KVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 296
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 28.3 bits (60), Expect = 2.4
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +3
Query: 342 AIMQLCFSPDGSHLYTGATDNTVAVWDV 425
A++ +SPDG H+ +G+ D + ++D+
Sbjct: 584 ALINQSWSPDGLHISSGSADPVIHIFDI 611
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 345 IMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ LC+ PDG + G D T+++ DV
Sbjct: 67 VTSLCWRPDGKAIAVGLEDGTISLHDV 93
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 333 HTGAIMQLCFSPD-GSHLYTGATDNTVAVWD 422
HT + +CF+ + G+ + +G+ DN VWD
Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWD 300
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDV 425
S D IW V + +++KGH + + +SP + + T + D TV +W++
Sbjct: 355 SGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWNI 411
Score = 26.6 bits (56), Expect = 7.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 363 SPDGSHLYTGATDNTVAVWDV 425
SPDG ++ +G++D +W V
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQV 367
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 360 FSPDGSHLYTGATDNTVAVWDV 425
F PDG L TG + + V +WDV
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDV 382
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 243 RQTFASAGFDRQILIWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
+ A+ G D ++++ GQ + + GH+ + + F D + T + D TV +W
Sbjct: 234 KDVIATGGVDATAVLFDRPSGQI--LSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Query: 420 DVP 428
P
Sbjct: 292 RNP 294
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 360 FSPDGSHLYTGATDNTVAVWDV 425
F PDG L TG + + V +WDV
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDV 382
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 243 RQTFASAGFDRQILIWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
+ A+ G D ++++ GQ + + GH+ + + F D + T + D TV +W
Sbjct: 234 KDVIATGGVDATAVLFDRPSGQI--LSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Query: 420 DVP 428
P
Sbjct: 292 RNP 294
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 422
++ H A+ + S D S + + D+TV VWD
Sbjct: 1077 LQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
>At4g27620.2 68417.m03970 expressed protein
Length = 325
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 122 SAPEKRQLLLHLFHEHQTCMRQLCCWKDTKEKFSQANFILK 244
S+P+ ++ + +H+H TC C + + FS+ I K
Sbjct: 138 SSPDHLEVPMKAYHQHSTCSDSPCVSESGSDIFSKREVIQK 178
>At4g27620.1 68417.m03969 expressed protein
Length = 325
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 122 SAPEKRQLLLHLFHEHQTCMRQLCCWKDTKEKFSQANFILK 244
S+P+ ++ + +H+H TC C + + FS+ I K
Sbjct: 138 SSPDHLEVPMKAYHQHSTCSDSPCVSESGSDIFSKREVIQK 178
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
F S D + W G E + H G I L S DG T + D+ V ++DV
Sbjct: 84 FISGSMDGHLKFWKKKGVGIEFAKHFRSHLGPIEGLAVSIDGLLCCTISNDHAVKIYDV 142
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 300 GQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDV 425
G C + ++GH+ L +S HL +G+ D + +WD+
Sbjct: 166 GACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDI 208
>At5g09820.1 68418.m01136 plastid-lipid associated protein PAP /
fibrillin family protein low similarity to plastid-lipid
associated protein PAP3 [Brassica rapa] GI:14248552;
contains Pfam profile PF04755: PAP_fibrillin
Length = 259
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = -2
Query: 176 KFDVRGTDEVTTAFSLVPTTEISCRTRLEGTRDTSS 69
KFDVRG + + F +V + +IS ++ +E T ++S+
Sbjct: 183 KFDVRGLNLLDGEFRIVASFKISSKSSVEITYESST 218
>At5g04800.2 68418.m00499 40S ribosomal protein S17 (RPS17D) 40S
ribosomal protein S17, Lycopersicon esculentum,
EMBL:AF161704
Length = 141
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 46 DIETKRKA-EDVSLVPSKRVRHEISVVGT 129
D T +K E+V+++PSKR+R++I+ T
Sbjct: 27 DFHTNKKILEEVAIIPSKRLRNKIAGFST 55
>At5g04800.1 68418.m00498 40S ribosomal protein S17 (RPS17D) 40S
ribosomal protein S17, Lycopersicon esculentum,
EMBL:AF161704
Length = 141
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 46 DIETKRKA-EDVSLVPSKRVRHEISVVGT 129
D T +K E+V+++PSKR+R++I+ T
Sbjct: 27 DFHTNKKILEEVAIIPSKRLRNKIAGFST 55
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Frame = +3
Query: 303 QCENVMVMKGHTGA-----IMQLCFSPDGSHLYTGATDNTVAVWDV 425
Q E+ M+ G G + +CF+ GS L G D V VWD+
Sbjct: 462 QMESKMIWLGLQGERSQSPVTSVCFNQIGSLLLAGYGDGHVTVWDM 507
>At3g44770.1 68416.m04820 hypothetical protein contains Pfam profile
PF04776: Protein of unknown function (DUF626)
Length = 505
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 280 ICLSKPA--EANVCLQDEICL*KFLLGVLP 197
IC KP E +CL DE + KF GV+P
Sbjct: 254 ICRIKPKTPEREICLVDEEAIDKFYRGVMP 283
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 276 QILIWNVYGQCENVMVMK-GHT---GAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
++ +W++ C V++ K H I Q S DGS + D T+ WDV T
Sbjct: 314 KVYVWDLKS-CPPVLITKLSHNQSKSVIRQTAMSVDGSTILACCEDGTIWRWDVIT 368
>At3g10610.1 68416.m01276 40S ribosomal protein S17 (RPS17C) similar
to 40S ribosomal protein S17 GB:AAD50774 [Lycopersicon
esculentum]
Length = 140
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 46 DIETKRKA-EDVSLVPSKRVRHEISVVGT 129
D T +K E+V+++PSKR+R++I+ T
Sbjct: 27 DFHTNKKILEEVAIIPSKRLRNKIAGFST 55
>At2g43500.1 68415.m05405 RWP-RK domain-containing protein low
similarity to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 947
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 147 YFICSTNIKLVCANYVVGRTPRRNFHR 227
YF C T +K +C + + R P R ++
Sbjct: 624 YFFCPTTLKRICRQHGIMRWPSRKINK 650
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
D I +++ + + V GH A+ + F + + L + +TD+T+ +WDV
Sbjct: 527 DHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSN-NELASASTDSTLRLWDV 577
>At2g05220.1 68415.m00550 40S ribosomal protein S17 (RPS17B)
Length = 140
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 46 DIETKRKA-EDVSLVPSKRVRHEISVVGT 129
D T +K E+V+++PSKR+R++I+ T
Sbjct: 27 DFHTNKKILEEVAIIPSKRLRNKIAGFST 55
>At2g04390.1 68415.m00442 40S ribosomal protein S17 (RPS17A)
Length = 141
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 46 DIETKRKA-EDVSLVPSKRVRHEISVVGT 129
D T +K E+V+++PSKR+R++I+ T
Sbjct: 27 DFHTNKKILEEVAIIPSKRLRNKIAGFST 55
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 360 FSPDGSHLYTGATDNTVAVWDV 425
F PDG L TG + V +WDV
Sbjct: 362 FHPDGLILGTGTAQSIVKIWDV 383
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 219 FHRQISS*RQTFASAGFDRQILIWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA 395
F I + A+ G D ++++ GQ + + GH+ + + F D + T +
Sbjct: 226 FSMDILHSKDVIATGGIDTTAVLFDRPSGQI--LSTLTGHSKKVTSIKFVGDTDLVLTAS 283
Query: 396 TDNTVAVW 419
+D TV +W
Sbjct: 284 SDKTVRIW 291
>At3g58900.1 68416.m06564 F-box family protein contains F-box domain
Pfam:PF00646
Length = 327
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 79 SLVPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTGKFHPEGKHLL 258
S +P++ + H +S + T+E A+ + R NL+A + LE + K +
Sbjct: 5 SSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREKEGI 64
Query: 259 LQALTD 276
LQ+ D
Sbjct: 65 LQSFMD 70
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
D + W + ++GH A+ LC + GS + +G D + VW
Sbjct: 359 DGTVNFWEGQKYLSHGGTLRGHRLAV--LCLAAAGSLVLSGGADKNICVW 406
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +3
Query: 258 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
S +D+ + +W + + + ++ H AI + D L+TG+ D T+ VW
Sbjct: 266 SGSWDKTLKVWRL-SDSKCLESIQAHDDAINTVAAGFDDL-LFTGSADGTLKVW 317
>At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transferase,
putative similar to O-GlcNAc transferase, Homo sapiens
[SP|O15294], Rattus norvegicus [SP|P56558]; contains
Pfam profile PF00515: TPR Domain; identical to cDNA
GI:18139886
Length = 977
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +2
Query: 134 KRQLLLHLFHEHQTC-----MRQLCCWKDTKEKFSQANFILKANI 253
K+ LLL TC ++ +CCW+D + F++ I++ I
Sbjct: 485 KQALLLRPDFPEATCNLLHTLQCVCCWEDRSKMFAEVESIIRRQI 529
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +3
Query: 270 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
D + W + + GH A+ LC + GS L +G D + VW
Sbjct: 355 DGTVNFWERQKYLTHKGTIHGHRMAV--LCLATAGSLLLSGGADKNICVW 402
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 419
+NV+ ++ H A+ L + D LY+G+ D T+ VW
Sbjct: 237 KNVLKIR-HFDAVSCLSLNEDLGLLYSGSWDKTLKVW 272
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/60 (23%), Positives = 26/60 (43%)
Frame = +3
Query: 252 FASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 431
F + Q+ ++++ Q V+ AI + PDG +Y G +A +D+ T
Sbjct: 231 FVTGTKSHQVRLYDISTQRRPVLSFDFRETAITSIAEDPDGHTIYVGNASADLASFDIRT 290
>At5g40520.1 68418.m04916 expressed protein
Length = 693
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -1
Query: 390 QCTNVNHQVRSKAALLLPCDLSSPSHSRIDHTHSILIFVCQSLQKQ 253
Q + + Q+R K LL CD+S S DHT FV +SL ++
Sbjct: 20 QIKDQDEQIRLKRRWLLGCDMSD---STKDHTPGKTEFVPESLLRE 62
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 309 ENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVW 419
+ + GH G + + F+ DG ++ + A + +AVW
Sbjct: 189 KKIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERYIAVW 226
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 327 KGHTGAIMQLCFSPDGSHLYTGAT 398
K T + LC SPDG L T +T
Sbjct: 155 KASTKTVSSLCVSPDGKILVTAST 178
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 333 HTGAIMQLCFSPDGSHLY-TGATDNTVAVWDV 425
H I + F+P H+ T +TD T +WD+
Sbjct: 347 HERRINSIDFNPQNPHVMATSSTDGTACLWDL 378
>At1g69480.1 68414.m07983 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 777
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 102 YSLGGYK-RHILCFSFSFYIWHFLRCLFTYLF 10
YSL G+ H+L +S + Y W R +T++F
Sbjct: 417 YSLFGFIILHMLMYSANIYFWKRYRVNYTFIF 448
>At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repeats
(PF00400) (1 weak) submitForm();
Length = 927
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 327 KGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV-PT 431
+ HT I LCF P G+ L T + N + V+ + PT
Sbjct: 378 RAHTSPISALCFDPSGTLLVTASIHGNNINVFRIMPT 414
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 327 KGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWD 422
K HT + + +P D ++TG+ D T+ VWD
Sbjct: 207 KVHTMGVCCISSNPSDPYSIFTGSYDETLRVWD 239
>At5g52800.1 68418.m06552 expressed protein ; expression supported
by MPSS
Length = 618
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 282 LIWNVYGQCENVMVMKGHTGAIMQLCFSPD 371
LI NV CE ++V K + + LCF +
Sbjct: 357 LICNVESDCEKLLVCKMESDCMKTLCFDTE 386
>At3g19720.2 68416.m02498 dynamin family protein identical to cDNA
dynamin-like protein (ARC5) GI: 30349145; contains Pfam
profile PF00350: Dynamin family
Length = 741
Score = 26.2 bits (55), Expect = 9.6
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -2
Query: 269 KACRSKCLPSG*NLPVKISPWCPSNNIIGAYKF--DVRGTDEVTTAFSLVPTTEISCRTR 96
K+CR KC+ + ++ + N G +F GT+ TT+ S + TTE+
Sbjct: 556 KSCRDKCMEDLASTTRYVTWSLHNKNRAGLRQFLDSFGGTEHNTTSGSSIQTTEMRLADL 615
Query: 95 LEGT 84
L+ T
Sbjct: 616 LDST 619
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 26.2 bits (55), Expect = 9.6
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = +3
Query: 324 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 425
+ GH+ + FS + ++ + + D T+ VW++
Sbjct: 212 LTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWEL 245
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,245,070
Number of Sequences: 28952
Number of extensions: 215797
Number of successful extensions: 1164
Number of sequences better than 10.0: 212
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 685039728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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