Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0643
(435 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 119 2e-26
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 116 3e-25
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 103 1e-21
UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3; Eukaryo... 99 2e-20
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 73 3e-12
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;... 66 4e-10
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 56 3e-07
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 55 6e-07
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 50 2e-05
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 47 2e-04
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 45 6e-04
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 45 6e-04
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 40 0.030
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 38 0.070
UniRef50_A1K3L4 Cluster: General secretion pathway protein F; n=... 36 0.49
UniRef50_A4M7J6 Cluster: Flagellar motor switch protein FliM; n=... 31 8.0
UniRef50_Q0DPB7 Cluster: Os03g0702000 protein; n=6; Oryza sativa... 31 8.0
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 119 bits (287), Expect = 2e-26
Identities = 51/59 (86%), Positives = 58/59 (98%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+
Sbjct: 1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGF 59
Score = 89.0 bits (211), Expect = 4e-17
Identities = 41/60 (68%), Positives = 44/60 (73%)
Frame = +3
Query: 255 PVAKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
PV KG TYGKPKSHGVNQLKP R LQSIAEE +SYW+AQD+SYKYFEVI
Sbjct: 74 PVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVI 133
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 116 bits (278), Expect = 3e-25
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQGY
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGY 59
Score = 78.2 bits (184), Expect = 7e-14
Identities = 36/60 (60%), Positives = 42/60 (70%)
Frame = +3
Query: 255 PVAKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
PV KGATYGKP HGVNQLK R+LQS+AEE +SYWV +DS+YK+FEVI
Sbjct: 74 PVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 133
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 103 bits (248), Expect = 1e-21
Identities = 42/59 (71%), Positives = 53/59 (89%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
MGAY+Y+QE++RKK SD +R+LLR+R W YRQL+ +HR PRPTRP+KARRLGYRAKQG+
Sbjct: 1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGF 59
Score = 72.1 bits (169), Expect = 5e-12
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +3
Query: 255 PVAKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
PV KG TYGKPK+HGVN+LK ++ Q++AE +SYWVA+DS+YK++EV+
Sbjct: 74 PVCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVV 133
>UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3;
Eukaryota|Rep: 60S ribosomal protein L15 - Brugia
pahangi (Filarial nematode worm)
Length = 71
Score = 99 bits (238), Expect = 2e-20
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
MGAYRY+QEL+RKK S+ MR+LLR+R WQYRQLT +HR RPTRP+KARRLGY + +GY
Sbjct: 1 MGAYRYMQELWRKKKSETMRYLLRIRCWQYRQLTAIHRVSRPTRPEKARRLGYLSNEGY 59
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 72.5 bits (170), Expect = 3e-12
Identities = 36/58 (62%), Positives = 42/58 (72%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 210
MGAYR + EL+R+K SDVM F+ RVR W +R R RPTRPDKARRLG +AKQG
Sbjct: 1 MGAYRCVSELWRRKQSDVMTFVQRVRCWDHR---RQPAIGRPTRPDKARRLGDKAKQG 55
Score = 33.1 bits (72), Expect = 2.6
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +3
Query: 255 PVAKGATYGKPKSHGVNQLKPTRN 326
PV KG Y KPK G+ QLK RN
Sbjct: 333 PVPKGIVYSKPKHQGITQLKFQRN 356
>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 4e-10
Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Frame = -2
Query: 434 DNLEILV*RILCNPVRAQHTXTXAXTANTFLSNGLKVARGLQLVDTMALGLAISGTLSNW 255
DNL+ + I NPV Q + + ++FLSN LK + +QLV+T+ LAIS TL W
Sbjct: 49 DNLKKFICEIFTNPVGIQDSQSSTMVPSSFLSNRLKASGKVQLVNTVVNRLAISCTLRKW 108
Query: 254 RLRPPR--RTRILNTT*PCLAR*PSLRALSGLVGLGARCIRVN*RYCHTLTRNKKRITSL 81
+ +TT L PS LSG +G GA N +YC T +K I S
Sbjct: 109 AFSTTTADTNPVKDTTLLSLVSQPS---LSGWMGWGALYSAENWQYCQQWTLRRKHIMSD 165
Query: 80 SFFLYNS 60
FFL++S
Sbjct: 166 CFFLHSS 172
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 56.0 bits (129), Expect = 3e-07
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 210
MG RY+ ++++K D +R +++ R+ ++R+ + R +PTR DKAR+ GY+AKQG
Sbjct: 1 MGTLRYVADIWKKPYEDPLRQVIKARLIKWRREPAILRVDKPTRIDKARKYGYKAKQG 58
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
+PK GV + + NLQ +AE+ SYWV +D+ YK+FEV+
Sbjct: 81 RPKRMGVYGVALSTNLQVVAEQRAARRFSNLEVLGSYWVGEDAMYKWFEVV 131
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 55.2 bits (127), Expect = 6e-07
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
MG Y+YI+E ++ + LL+ R+ ++R+ + R RPTR D+AR LGY+AKQGY
Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQGY 59
Score = 44.0 bits (99), Expect = 0.001
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
KP G + P ++LQ IAEE +SYWV +D YK+FEVI
Sbjct: 81 KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVI 131
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 50.0 bits (114), Expect = 2e-05
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +1
Query: 37 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 213
+ Y YI++ ++ K D R +LR R+ ++R+ + R RPTR ++AR LGY+AKQG+
Sbjct: 3 LSMYHYIEQTWQNK--DWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQGF 59
Score = 40.3 bits (90), Expect = 0.017
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
+PK GV P++ + IAEE SY+VA+D YKY+EVI
Sbjct: 81 RPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVI 131
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 46.8 bits (106), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 25 QAAKMGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAK 204
Q+ G Y +++E +++ L++ R+ ++R+ + R +PTR D+AR LGY+AK
Sbjct: 19 QSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVRIEKPTRLDRARALGYKAK 78
Query: 205 QG 210
QG
Sbjct: 79 QG 80
Score = 41.9 bits (94), Expect = 0.006
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
+PK GV P ++ + IAEE +SYWVA+D Y+++EVI
Sbjct: 103 RPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVLNSYWVAEDGEYEWYEVI 153
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 45.2 bits (102), Expect = 6e-04
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +1
Query: 43 AYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 210
AY Y+ YRK +V L+R + ++R+ + R RP R ++AR+LGY+AKQG
Sbjct: 5 AYSYMAMWYRKIGREVHERLMRKILIEWRKAPAIVRVERPFRLERARKLGYKAKQG 60
Score = 41.1 bits (92), Expect = 0.010
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
+PK GV + ++ + +AEE +SYWVA D Y+YFEVI
Sbjct: 83 RPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVADDGIYRYFEVI 133
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 45.2 bits (102), Expect = 6e-04
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
+ K GVN++ +NLQ IAEE +SYWV +D S K+FE I
Sbjct: 83 RTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAI 133
Score = 40.7 bits (91), Expect = 0.013
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +1
Query: 46 YRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 210
Y +I+E + + L R +R+ + R RPTR DKAR LGY+AKQG
Sbjct: 6 YSHIKEAWEDPDDGKLAELQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQG 60
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 39.5 bits (88), Expect = 0.030
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1
Query: 103 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 210
+R RV +R+ + R RPTR D+AR LGY+AKQG
Sbjct: 20 IRDRVIIWRKQNAVTRIERPTRIDRARSLGYKAKQG 55
Score = 31.5 bits (68), Expect = 8.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
+PK GV ++K +++ +A SY+V +D +Y +FEVI
Sbjct: 78 RPKHLGVTRIKADVSMKQVAVRRVLERYPNMSLLGSYFVYKDGAYYWFEVI 128
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 38.3 bits (85), Expect = 0.070
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 103 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 210
LR RV +R+ + R +P+R +ARRLGY+AKQG
Sbjct: 59 LRERVVGWRKQNAVTRIDKPSRIQRARRLGYKAKQG 94
Score = 34.3 bits (75), Expect = 1.1
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 282 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVI 434
+PK GV ++K N++++AE SY++ +D + +FEVI
Sbjct: 117 RPKHLGVTRIKADDNMKTVAERRVSERYPNMKLLGSYFIYKDGKHYWFEVI 167
>UniRef50_A1K3L4 Cluster: General secretion pathway protein F; n=1;
Azoarcus sp. BH72|Rep: General secretion pathway protein
F - Azoarcus sp. (strain BH72)
Length = 401
Score = 35.5 bits (78), Expect = 0.49
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -2
Query: 365 AXTANTFLSNGLKVARGL-QLVDTMALGLAISGTLSNWRLRPPRRTRIL 222
A TA + L V GL Q+ D +A G +SG L++ R+ PPR TR+L
Sbjct: 286 AVTAAAGTAGNLVVRTGLEQVADDIAAGADLSGALASTRVFPPRVTRML 334
>UniRef50_A4M7J6 Cluster: Flagellar motor switch protein FliM; n=1;
Petrotoga mobilis SJ95|Rep: Flagellar motor switch
protein FliM - Petrotoga mobilis SJ95
Length = 359
Score = 31.5 bits (68), Expect = 8.0
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = -1
Query: 213 ITLFSTVA*SSGFVRPCGPGSAVH------TSQLTVLPYSHTQQKTHNIAQFFPIQLLNI 52
ITL T+ GFV C P S++ T+++ Y HT++ N+ Q + LN+
Sbjct: 203 ITLSVTIKNVQGFVNLCFPSSSLEPLNDKLTTRMWTTSYRHTEEFKENLRQSLLLSKLNL 262
Query: 51 S 49
S
Sbjct: 263 S 263
>UniRef50_Q0DPB7 Cluster: Os03g0702000 protein; n=6; Oryza
sativa|Rep: Os03g0702000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 503
Score = 31.5 bits (68), Expect = 8.0
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -2
Query: 347 FLSNGLKVARGLQLVDTMALGLAISGTLSNWRLRPP 240
+++ G +V G++ V +ALGL ++GT W LR P
Sbjct: 318 YVALGSEVPLGVEKVHELALGLELAGTRFLWALRKP 353
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,699,280
Number of Sequences: 1657284
Number of extensions: 8830252
Number of successful extensions: 21337
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21332
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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