Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0643
         (435 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   2.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   3.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   5.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.7  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   8.9  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 99  KTHNIAQFFPIQLLNISVGTHLS 31
           + H +   FPI L  ISV T L+
Sbjct: 386 RQHAVTAKFPIYLYRISVETKLN 408


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 10  ARRLPQAAKMGAY 48
           ++R+PQ AK GAY
Sbjct: 286 SQRVPQLAKNGAY 298


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = +3

Query: 390 YWVAQDSSYKYFEVI 434
           Y+V ++  YKY++++
Sbjct: 151 YFVQRNQEYKYYQIL 165


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 234 ATWWPQAPVAKGATY 278
           ATW PQ+P   G  +
Sbjct: 287 ATWDPQSPFIDGPVF 301


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 269 TLSNWRLRPPRRTRI 225
           T S+W  RPP+R  +
Sbjct: 33  TASSWPGRPPKRAPV 47


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 244 HHVAHGF*IQHNLV*H 197
           HH  H    QH++V H
Sbjct: 324 HHAGHHIHAQHHVVNH 339


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,580
Number of Sequences: 336
Number of extensions: 2240
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)