Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0639
         (429 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0EEL2 Cluster: Chromosome undetermined scaffold_91, wh...    35   0.62 
UniRef50_A6UQW7 Cluster: Putative uncharacterized protein; n=1; ...    34   1.4  
UniRef50_A5DHA3 Cluster: Lysophospholipase NTE1; n=1; Pichia gui...    33   3.3  
UniRef50_Q8I3W6 Cluster: Helicase, belonging to UvrD family, put...    32   4.4  
UniRef50_Q98RL8 Cluster: Putative uncharacterized protein orf714...    32   5.8  
UniRef50_Q4N204 Cluster: Putative uncharacterized protein; n=1; ...    32   5.8  
UniRef50_Q30SG2 Cluster: Putative uncharacterized protein; n=1; ...    31   7.7  

>UniRef50_A0EEL2 Cluster: Chromosome undetermined scaffold_91, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_91,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 2552

 Score = 35.1 bits (77), Expect = 0.62
 Identities = 18/50 (36%), Positives = 31/50 (62%)
 Frame = +1

Query: 244 KTFYSNLFLFYHLKSIVSFFFLNPEFNKVKENKSLVQFLLLCIVYKTSYL 393
           K FY  + L++   +++S F L+P+FN +K   + +  L+LC  YK +YL
Sbjct: 697 KFFYYFVELYFQQPTLLSDFGLDPDFNTLKLAGTGIALLVLC-AYKRAYL 745


>UniRef50_A6UQW7 Cluster: Putative uncharacterized protein; n=1;
           Methanococcus vannielii SB|Rep: Putative uncharacterized
           protein - Methanococcus vannielii SB
          Length = 593

 Score = 33.9 bits (74), Expect = 1.4
 Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
 Frame = +1

Query: 247 TFYSNLFLFYHLKSIVSFFF---LNPEFNKVKENKSLVQFLL--LCIVYKTSYLN 396
           T Y++  + Y++++I+  F+       FN +K+N S V F+L  LCI++ ++Y N
Sbjct: 404 TMYASNRMMYNIQAIMPIFYGFGAYSIFNMLKKNFSKVLFILISLCIIFSSAYAN 458


>UniRef50_A5DHA3 Cluster: Lysophospholipase NTE1; n=1; Pichia
           guilliermondii|Rep: Lysophospholipase NTE1 - Pichia
           guilliermondii (Yeast) (Candida guilliermondii)
          Length = 1438

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 45  WTLFNILRWFSLPLPSIL*GMCMVT 119
           WT F ++ WF + LPSIL GM   T
Sbjct: 36  WTCFRVVNWFLVTLPSILLGMLSKT 60


>UniRef50_Q8I3W6 Cluster: Helicase, belonging to UvrD family,
            putative; n=3; Plasmodium|Rep: Helicase, belonging to
            UvrD family, putative - Plasmodium falciparum (isolate
            3D7)
          Length = 1441

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = +1

Query: 259  NLFLFYHLKSIVSFFFLNPEFNKVKENKSLVQFLLLCIVYKTSYL 393
            N+F    LKSIV FFF    F K   + + V +L++ ++ KT++L
Sbjct: 1020 NIFTEKELKSIVDFFFCINYFLKFAAHINSVYYLVIEVLKKTNFL 1064


>UniRef50_Q98RL8 Cluster: Putative uncharacterized protein orf714;
           n=1; Guillardia theta|Rep: Putative uncharacterized
           protein orf714 - Guillardia theta (Cryptomonas phi)
          Length = 714

 Score = 31.9 bits (69), Expect = 5.8
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = +1

Query: 265 FLFYHLKSIVSFFFLNPEFNKVKENKSLVQFLLLCIVYKTSYLNCNS 405
           +L   LK++ + FF+N  F   +  K L  FL+  I+++ ++L C +
Sbjct: 77  YLITILKNLNNIFFVNNWFINAQNKKILRSFLIFNIIFENNFLICKT 123


>UniRef50_Q4N204 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 1382

 Score = 31.9 bits (69), Expect = 5.8
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -2

Query: 386 DVLYTIHSNKNCTNDLFSLTLLNSGFKKKNDTIDFK 279
           D + T  SN+NCT  L    +LN+  KKK  TI +K
Sbjct: 304 DGILTRCSNENCTQFLHPRCILNTKLKKKRHTIVYK 339


>UniRef50_Q30SG2 Cluster: Putative uncharacterized protein; n=1;
           Thiomicrospira denitrificans ATCC 33889|Rep: Putative
           uncharacterized protein - Thiomicrospira denitrificans
           (strain ATCC 33889 / DSM 1351)
          Length = 212

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = -3

Query: 163 QKNGVNFKDFYTFYSVTIHIPHSMEGRGKENHLSILKSVH 44
           QKN  +F DFY  YS++   PHS E + KE  L +L S +
Sbjct: 10  QKNRDSFDDFYAIYSLS--FPHS-EQKSKEELLMMLHSTN 46


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 393,048,915
Number of Sequences: 1657284
Number of extensions: 6970264
Number of successful extensions: 15196
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15192
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)