Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0639
         (429 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   1.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   1.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   2.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   2.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   5.0  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 271 FYHLKSIVSFFFLNPEFNKVKENKSLVQFLL 363
           FY + S VS FF  P ++ ++    LVQ +L
Sbjct: 34  FYVVFSSVSTFFKIPFYSTLRPINLLVQIIL 64


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 271 FYHLKSIVSFFFLNPEFNKVKENKSLVQFLL 363
           FY + S VS FF  P ++ ++    LVQ +L
Sbjct: 34  FYVVFSSVSTFFKIPFYSTLRPINLLVQIIL 64


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 85  YPPYYEVCVW 114
           + PYY +C+W
Sbjct: 288 WTPYYVMCIW 297


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 85  YPPYYEVCVW 114
           + PYY +C+W
Sbjct: 288 WTPYYVMCIW 297


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 152 SKFQGFLYFLLCD 114
           S   GFL+ L+CD
Sbjct: 11  SAIAGFLFLLICD 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,513
Number of Sequences: 336
Number of extensions: 2288
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)