Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0636
         (434 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025013-1|ABE01243.1|  175|Drosophila melanogaster IP02009p pro...    29   3.6  
AE014298-3017|AAN09546.1|  197|Drosophila melanogaster CG15457-P...    29   3.6  
AE014298-3016|AAF50908.1|  175|Drosophila melanogaster CG15457-P...    29   3.6  

>BT025013-1|ABE01243.1|  175|Drosophila melanogaster IP02009p
           protein.
          Length = 175

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = -2

Query: 241 IRSHCSAGQSI---LNLLLRWTGGSSTWTAATRTAVP*SPQTQLSDVSTLKREKCISRHE 71
           +++HC  GQ+    L  LL  TG    W    R      PQ Q  ++ T  R +CI + +
Sbjct: 21  LQTHCVRGQTQAFDLAKLLPKTGTEPIWAVIDRNL----PQVQ--ELVTAARMECIQKLQ 74

Query: 70  ILYKKAITSKFTRPRHKNK 14
           +   +    K T P  K K
Sbjct: 75  LPRDQRPLGKVTNPSEKEK 93


>AE014298-3017|AAN09546.1|  197|Drosophila melanogaster CG15457-PB,
           isoform B protein.
          Length = 197

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = -2

Query: 241 IRSHCSAGQSI---LNLLLRWTGGSSTWTAATRTAVP*SPQTQLSDVSTLKREKCISRHE 71
           +++HC  GQ+    L  LL  TG    W    R      PQ Q  ++ T  R +CI + +
Sbjct: 21  LQTHCVRGQTQAFDLAKLLPKTGTEPIWAVIDRNL----PQVQ--ELVTAARMECIQKLQ 74

Query: 70  ILYKKAITSKFTRPRHKNK 14
           +   +    K T P  K K
Sbjct: 75  LPRDQRPLGKVTNPSEKEK 93


>AE014298-3016|AAF50908.1|  175|Drosophila melanogaster CG15457-PA,
           isoform A protein.
          Length = 175

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = -2

Query: 241 IRSHCSAGQSI---LNLLLRWTGGSSTWTAATRTAVP*SPQTQLSDVSTLKREKCISRHE 71
           +++HC  GQ+    L  LL  TG    W    R      PQ Q  ++ T  R +CI + +
Sbjct: 21  LQTHCVRGQTQAFDLAKLLPKTGTEPIWAVIDRNL----PQVQ--ELVTAARMECIQKLQ 74

Query: 70  ILYKKAITSKFTRPRHKNK 14
           +   +    K T P  K K
Sbjct: 75  LPRDQRPLGKVTNPSEKEK 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,150,933
Number of Sequences: 53049
Number of extensions: 223260
Number of successful extensions: 450
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)